RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 CARFQ8N187 725 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 ELOVL1Q9BW60 279 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 UCK1Q9HA47 277 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 KLHDC2Q9Y2U9 406 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 FAM24AA6NFZ4 105 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 C21orf140B9A014 251 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 NDUFB6O95139 128 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 RAB32Q13637 225 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 ISXQ2M1V0 245 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 VMA21Q3ZAQ7 101 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 NCMAPQ5T1S8 102 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 CD300LDQ6UXZ3 194 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 OR2W3Q7Z3T1 314 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 LRP11Q86VZ4 500 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 SCMH1Q96GD3 660 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 ZNF488Q96MN9 340 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 A0A1W2PNV4 684 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 BCL2L11O43521 198 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 GAMTQ14353 236 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 TMEM211Q6ICI0 200 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 RAB1BQ9H0U4 201 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 GOSR1O95249 250 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 SP1P08047 785 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 C21orf58P58505 322 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 GUK1Q16774 197 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 FAM209AQ5JX71 171 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 MDP1Q86V88 176 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 MTFP1Q9UDX5 166 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 NAGKQ9UJ70 344 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 PCOLCE2Q9UKZ9 415 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 TRAV8-7A0A075B6U6 113 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 PDCD6O75340 191 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 BGLAPP02818 100 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 FTH1P19P0C7X4 201 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 FGF9P31371 208 aaPredicted RBP8.95□□□□□ -0.98
CHD3-201ENST00000330494 ACAA2P42765 397 aaKnown RBP8.95□□□□□ -0.98
CHD3-201ENST00000330494 MIDNQ504T8 468 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 SPOCK3Q9BQ16 436 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 HDHD3Q9BSH5 251 aaPredicted RBP8.95□□□□□ -0.98
CHD3-201ENST00000330494 CFHR5Q9BXR6 569 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 IL36GQ9NZH8 169 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 A0A1W2PPE3 182 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 ADAP1O75689 374 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 CST2P09228 141 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 VWA1Q6PCB0 445 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 LINC00299Q6ZSB3 139 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 OR2H1Q9GZK4 316 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 DICER1Q9UPY3 1922 aaKnown RBP8.95□□□□□ -0.98
CHD3-201ENST00000330494 A0A1W2PQD3 144 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 RNASEK-C17orf49H0YIS7 233 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 TBC1D26Q86UD7 250 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 WFDC6Q9BQY6 131 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 NDFIP1Q9BT67 221 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 SLC25A22Q9H936 323 aa8.95□□□□□ -0.98
CHD3-201ENST00000330494 DUS4LO95620 317 aaKnown RBP8.94□□□□□ -0.98
CHD3-201ENST00000330494 ERVFC1-1P60608 527 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 PMS2P11Q13670 270 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 OR5C1Q8NGR4 320 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 ABHD14AQ9BUJ0 271 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 OPN3Q9H1Y3 402 aaPredicted RBP8.94□□□□□ -0.98
CHD3-201ENST00000330494 NTMQ9P121 344 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 LSM2Q9Y333 95 aaKnown RBP8.94□□□□□ -0.98
CHD3-201ENST00000330494 DBX1A6NMT0 343 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 M0R143 59 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 UPK3AO75631 287 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 ACTL6AO96019 429 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 ENDOGQ14249 297 aaKnown RBP8.94□□□□□ -0.98
CHD3-201ENST00000330494 MPPED2Q15777 294 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 NCR3LG1Q68D85 454 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 C11orf42Q8N5U0 333 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 ZNF485Q8NCK3 441 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 SAP30LQ9HAJ7 183 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 GPR27Q9NS67 375 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 IL17BQ9UHF5 180 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 TPRP12270 2363 aaKnown RBP8.94□□□□□ -0.98
CHD3-201ENST00000330494 GREM1O60565 184 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 HAND1O96004 215 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 ARRDC1Q8N5I2 433 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 FAM24BQ8N5W8 94 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 GABRA1P14867 456 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 ORM2P19652 201 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 TNXAQ16473 311 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 MS4A3Q96HJ5 214 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 CTDSP1Q9GZU7 261 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 MIOXQ9UGB7 285 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 IGHV1-45A0A0A0MS14 117 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 OR5H1A6NKK0 313 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 C4orf51C9J302 202 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 TCF21O43680 179 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 SFT2D2O95562 160 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 Q1RN00 199 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 TIGITQ495A1 244 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 DMKNQ6E0U4 476 aaPredicted RBP8.94□□□□□ -0.98
CHD3-201ENST00000330494 LINC00052Q96N35 136 aa8.94□□□□□ -0.98
CHD3-201ENST00000330494 J3KRW8 73 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 BMPR1BO00238 502 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 AESQ08117 197 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 ZNF383Q8NA42 475 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 TMEM37Q8WXS4 190 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 TRAPPC4Q9Y296 219 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms