RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 UQCC2Q9BRT2 126 aa12.16□□□□□ -0.46
CLRN1-203ENST00000328863 ACOT13Q9NPJ3 140 aa12.16□□□□□ -0.46
CLRN1-203ENST00000328863 ING4Q9UNL4 249 aa12.16□□□□□ -0.46
CLRN1-203ENST00000328863 MRPS28Q9Y2Q9 187 aaKnown RBP12.16□□□□□ -0.46
CLRN1-203ENST00000328863 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 MDFIC2A0A1B0GVS7 189 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 SLC33A1O00400 549 aaPredicted RBP12.15□□□□□ -0.46
CLRN1-203ENST00000328863 DEGS1O15121 323 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 NPFFO15130 113 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 SC5DO75845 299 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 ARL6IP5O75915 188 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 CLPXO76031 633 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 FBP1P09467 338 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 ZNF728P0DKX0 622 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 GTF2F2P13984 249 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 GABRA5P31644 462 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 KCNJ3P48549 501 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 UBE2E1P51965 193 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 RBM11P57052 281 aaKnown RBP12.15□□□□□ -0.46
CLRN1-203ENST00000328863 INSL4Q14641 139 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 ATXN7L3Q14CW9 347 aaPredicted RBP12.15□□□□□ -0.46
CLRN1-203ENST00000328863 MPV17LQ2QL34 196 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 DEFB112Q30KQ8 113 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 PIGYQ3MUY2 71 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 SLC22A6Q4U2R8 563 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 PAN3Q58A45 887 aaKnown RBP12.15□□□□□ -0.46
CLRN1-203ENST00000328863 ZDHHC22Q8N966 263 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 Q8NFD4 153 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 FAM216AQ8WUB2 273 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 FCGR1BQ92637 280 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 SLC25A28Q96A46 364 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 FOXRED1Q96CU9 486 aaPredicted RBP12.15□□□□□ -0.46
CLRN1-203ENST00000328863 NR1H4Q96RI1 486 aaPredicted RBP12.15□□□□□ -0.46
CLRN1-203ENST00000328863 YTHDF1Q9BYJ9 559 aaKnown RBP12.15□□□□□ -0.46
CLRN1-203ENST00000328863 GAL3ST2Q9H3Q3 398 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 ESM1Q9NQ30 184 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 ST3GAL6Q9Y274 331 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 UBE2J1Q9Y385 318 aaPredicted RBP12.15□□□□□ -0.46
CLRN1-203ENST00000328863 SF3B6Q9Y3B4 125 aaKnown RBP12.15□□□□□ -0.46
CLRN1-203ENST00000328863 FAM96BQ9Y3D0 163 aa12.15□□□□□ -0.46
CLRN1-203ENST00000328863 CLDN34H7C241 214 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 HSPB6O14558 160 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 OR7C1O76099 320 aaPredicted RBP12.14□□□□□ -0.47
CLRN1-203ENST00000328863 PAHP00439 452 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 UCHL1P09936 223 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 RPS25P62851 125 aaKnown RBP12.14□□□□□ -0.47
CLRN1-203ENST00000328863 KRBOX4Q5JUW0 171 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 GLT8D1Q68CQ7 371 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 Q6P435 159 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 GLIPR1L1Q6UWM5 242 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 TCF23Q7RTU1 214 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 CEACAM19Q7Z692 300 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 TPRX1Q8N7U7 411 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
CLRN1-203ENST00000328863 TNFRSF14Q92956 283 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 TMEM203Q969S6 136 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 MRPS24Q96EL2 167 aaKnown RBP12.14□□□□□ -0.47
CLRN1-203ENST00000328863 CST11Q9H112 138 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 HEXA-AS1Q9H8Q6 139 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 GHRLQ9UBU3 117 aa12.14□□□□□ -0.47
CLRN1-203ENST00000328863 A0A0G2JK05 382 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 A0A0U1RQK1 487 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 MEIOCA2RUB1 952 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 C17orf98A8MV24 154 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 RRP9O43818 475 aaKnown RBP12.13□□□□□ -0.47
CLRN1-203ENST00000328863 RNASE1P07998 156 aaKnown RBP12.13□□□□□ -0.47
CLRN1-203ENST00000328863 UBBP0CG47 229 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 COX7A1P24310 79 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 SAA4P35542 130 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 DLX1P56177 255 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 PRB3Q04118 309 aaPredicted RBP12.13□□□□□ -0.47
CLRN1-203ENST00000328863 MIDNQ504T8 468 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 FAM27D1Q5T7N8 215 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 ZNF782Q6ZMW2 699 aaPredicted RBP12.13□□□□□ -0.47
CLRN1-203ENST00000328863 LDLRAD3Q86YD5 345 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 TMEM86BQ8N661 226 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 OR13D1Q8NGV5 346 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 SPATA3Q8NHX4 192 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 SSMEM1Q8WWF3 244 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 PRDM13Q9H4Q3 707 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 SPACA1Q9HBV2 294 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 NDUFB11Q9NX14 153 aa12.13□□□□□ -0.47
CLRN1-203ENST00000328863 FBN1P35555 2871 aaKnown RBP12.12□□□□□ -0.47
CLRN1-203ENST00000328863 ODAMA1E959 279 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 BTBD17A6NE02 478 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 HOXA3O43365 443 aaPredicted RBP12.12□□□□□ -0.47
CLRN1-203ENST00000328863 MELTFP08582 738 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 IGHV1-8P0DP01 117 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 DLX6P56179 175 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 EMX1Q04741 257 aaPredicted RBP12.12□□□□□ -0.47
CLRN1-203ENST00000328863 AESQ08117 197 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 Q6YL49 198 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 OR4D6Q8NGJ1 314 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 COQ2Q96H96 371 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 DUX5Q96PT3 197 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 OR6C3Q9NZP0 311 aa12.12□□□□□ -0.47
CLRN1-203ENST00000328863 ZNRD1Q9P1U0 126 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms