RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZNF154Q13106 437 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF542PQ5EBM4 170 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 SLC25A47Q6Q0C1 308 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 CCDC71LQ8N9Z2 235 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 ACY3Q96HD9 319 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 LAMP3Q9UQV4 416 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 A0A1W2PQF6 199 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 DHRS3O75911 302 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 METTL15P1P0C7V9 234 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 PMS2P11Q13670 270 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 IQCJQ1A5X6 159 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 C9orf50Q5SZB4 431 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF66Q6ZN08 573 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 Q6ZSR6 202 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 C16orf82Q7Z2V1 217 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 TGIF2LYQ8IUE0 185 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 OR10J5Q8NHC4 309 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-201ENST00000327554 ST8SIA1Q92185 356 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 ATP5SQ99766 215 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM222Q9H0R3 208 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 ALKBH4Q9NXW9 302 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 GOLT1BQ9Y3E0 138 aa11.07□□□□□ -0.64
CCDC60-201ENST00000327554 MPPED1O15442 326 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 NPSP0C0P6 89 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 AADACP22760 399 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 LBX1P52954 281 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 GRB2P62993 217 aaKnown RBP11.06□□□□□ -0.64
CCDC60-201ENST00000327554 HERPUD1Q15011 391 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM31Q5JXX7 168 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 C1orf194Q5T5A4 169 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 C20orf196Q8IYI0 205 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 SLC22A18ASQ8N1D0 253 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF441Q8N8Z8 693 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM170AQ8WVE7 144 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 PP6455Q8WZ26 134 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM18Q96B42 140 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 ABHD14BQ96IU4 210 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 SIGLEC12Q96PQ1 595 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 OBP2AQ9NY56 170 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 MYOTQ9UBF9 498 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 ANKUB1A6NFN9 424 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 B4E171 279 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 SHISA8B8ZZ34 492 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 H3BML4 177 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 IFNL4K9M1U5 179 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 ANGPTL7O43827 346 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 TNFP01375 233 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 CTSSP25774 331 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 TSPAN7P41732 249 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF726P1Q15940 193 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 KCNMB1Q16558 191 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 C1orf189Q5VU69 101 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 CARD17Q5XLA6 110 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF787Q6DD87 383 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 Q6ZPA2 131 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 SSX7Q7RTT5 188 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 THNSL2Q86YJ6 484 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 IL22RA1Q8N6P7 574 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 PLPPR1Q8TBJ4 325 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM56Q96MV1 263 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 RPRMQ9NS64 109 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 VDAC3Q9Y277 283 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 PIGLQ9Y2B2 252 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 POLR3KQ9Y2Y1 108 aaPredicted RBP11.06□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM56-RWDD3S4R434 201 aa11.06□□□□□ -0.64
CCDC60-201ENST00000327554 SEC16AO15027 2179 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 PCDH15Q96QU1 1955 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 VCANP13611 3396 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 CCDC163A0A0D9SF12 145 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 ADAM20O43506 726 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 IGHG1P01857 330 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 CRYABP02511 175 aaKnown RBP11.05□□□□□ -0.64
CCDC60-201ENST00000327554 NTSR1P30989 418 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 PAX9P55771 341 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 SRPXP78539 464 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 ID3Q02535 119 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 GAGE1Q13065 139 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 BRICD5Q6PL45 260 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 SELENOHQ8IZQ5 122 aaKnown RBP11.05□□□□□ -0.64
CCDC60-201ENST00000327554 NECAP1Q8NC96 275 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 OR13H1Q8NG92 308 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 OR51G1Q8NGK1 321 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 DDIT4LQ96D03 193 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF845Q96IR2 970 aaPredicted RBP11.05□□□□□ -0.64
CCDC60-201ENST00000327554 P2RX4Q99571 388 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 SPIN2AQ99865 258 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 SPIN2BQ9BPZ2 258 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 GPR173Q9NS66 373 aa11.05□□□□□ -0.64
CCDC60-201ENST00000327554 A0A0U1RQV5 110 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 SLC33A1O00400 549 aaPredicted RBP11.04□□□□□ -0.64
CCDC60-201ENST00000327554 TRAF3IP2O43734 574 aaPredicted RBP11.04□□□□□ -0.64
CCDC60-201ENST00000327554 EFNA2O43921 213 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 CCKARP32238 428 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 PCP4P48539 62 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 MNX1P50219 401 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms