RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CBX5P45973 191 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 IFITM3Q01628 133 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 COL10A1Q03692 680 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 ARFRP1Q13795 201 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 OR5T2Q8NGG2 359 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 NEK7Q8TDX7 302 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 MARVELD3Q96A59 401 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 MTFP1Q9UDX5 166 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 ANAPC10Q9UM13 185 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 AKAP6Q13023 2319 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 HSPB6O14558 160 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 LY6HO94772 140 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 ACTBP60709 375 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 BTG1P62324 171 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 ACTG1P63261 375 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 STEAP3Q658P3 488 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 LYSMD2Q8IV50 215 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 DYRK2Q92630 601 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 SDSLQ96GA7 329 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 CMSS1Q9BQ75 279 aaKnown RBP8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 DNTTIP1Q9H147 329 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 CHODLQ9H9P2 273 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 C12orf4Q9NQ89 552 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 METRNQ9UJH8 293 aa8.57□□□□□ -1.04
VIPAS39-201ENST00000327028 TMEM82A0PJX8 343 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 NKX6-3A6NJ46 265 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF737O75373 536 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 RBBP9O75884 186 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 GYPAP02724 150 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 TFF1P04155 84 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 RCVRNP35243 200 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 GABRA2P47869 451 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 OR3A1P47881 315 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 INPP1P49441 399 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 MRPS15P82914 257 aaKnown RBP8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 KCNJ8Q15842 424 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ATPAF1Q5TC12 328 aaPredicted RBP8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 BPIFB2Q8N4F0 458 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 DEFB108BQ8NET1 73 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 GAFA1Q96PS6 74 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 OCSTAMPQ9BR26 566 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 HDHD3Q9BSH5 251 aaPredicted RBP8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 PPA2Q9H2U2 334 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 KLK11Q9UBX7 282 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 USF3Q68DE3 2245 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 MEIS3P1A6NDR6 274 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ORC5O43913 435 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 PSPNO60542 156 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 NDUFS7O75251 213 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 IGHV2-70P01814 119 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 AMY2BP19961 511 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 DTYMKP23919 212 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 KCNJ3P48549 501 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ZMYND11Q15326 602 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF787Q6DD87 383 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF788Q6ZQV5 615 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 C17orf107Q6ZR85 190 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF561Q8N587 486 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 CHST6Q9GZX3 395 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF665Q9H7R5 613 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 MYOZ1Q9NP98 299 aaPredicted RBP8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 IFT46Q9NQC8 304 aa8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF701Q9NV72 531 aaPredicted RBP8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF107Q9UII5 783 aaPredicted RBP8.56□□□□□ -1.04
VIPAS39-201ENST00000327028 ISPDA4D126 451 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 SIGLEC5O15389 551 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 ECDO95905 644 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 NAPSAO96009 420 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 CSN2P05814 226 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 CSF1P09603 554 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 AP3S2P59780 193 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 PAX5Q02548 391 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 KLF9Q13886 244 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 DCDC5Q6ZRR9 648 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 PEG10Q86TG7 708 aaKnown RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 GAPTQ8N292 157 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 ASCC1Q8N9N2 400 aaKnown RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 OR4S1Q8NGB4 309 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 PPP1R35Q8TAP8 253 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 PLPPR1Q8TBJ4 325 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 TIMD4Q96H15 378 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 SNX22Q96L94 193 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 RIMS4Q9H426 269 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 TAS2R8Q9NYW2 309 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 CENPEQ02224 2701 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 FASNP49327 2511 aaKnown RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 ANKRD20A5PA0PJZ0 165 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 TNFRSF13BO14836 293 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 NDUFA2O43678 99 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 IGHV4-39P01824 125 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 FCGR3AP08637 254 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 GSTT2BP0CG30 244 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 PAX1P15863 534 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 ATXN7L3Q14CW9 347 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF57Q68EA5 555 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF497Q6ZNH5 498 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 HOGA1Q86XE5 327 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 MUC20Q8N307 709 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 TOMM5Q8N4H5 51 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms