RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PLGLB1Q02325 96 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 ZNF528Q3MIS6 628 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 NCMAPQ5T1S8 102 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 NSUN5P2Q63ZY6 315 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 TCEAL6Q6IPX3 200 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 ANGPTL4Q9BY76 406 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 OR2H1Q9GZK4 316 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 DOCK10Q96BY6 2186 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 CEACAM18A8MTB9 384 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 ZNF587BE7ETH6 402 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 SERPINE2P07093 398 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 SUCLG1P53597 346 aaKnown RBP11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 PCBD1P61457 104 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 ZNF385CQ66K41 422 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 MKXQ8IYA7 352 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 GAPTQ8N292 157 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 OR2Y1Q8NGV0 311 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 OR2V1Q8NHB1 315 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 HIST1H2BAQ96A08 127 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 C12orf49Q9H741 205 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 OR6C6A6NF89 314 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 ZNF732B4DXR9 585 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 PRSS44E7EML9 344 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 ATXN7O15265 892 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 OR2C1O95371 312 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 H2AFB1P0C5Y9 115 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 UBE2KP61086 200 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 ARF1P84077 181 aaKnown RBP11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 FAM3AP98173 230 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 IGFBP7Q16270 282 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 C3AR1Q16581 482 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 ZNF674Q2M3X9 581 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 CMTM1Q8IZ96 169 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 C17orf78Q8N4C9 275 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 UBAC2Q8NBM4 344 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 CCL28Q9NRJ3 127 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 STARD10Q9Y365 291 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 SPTBN2O15020 2390 aa11.15□□□□□ -0.63
HMGCS1-201ENST00000325110 ADAMTS9Q9P2N4 1935 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 CPAMD8Q8IZJ3 1885 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 ZNF724A8MTY0 619 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 MSTNO14793 375 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 MPPED1O15442 326 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 NDUFA2O43678 99 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 SYNGR3O43761 229 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 RBMXL2O75526 392 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 GAPDHP04406 335 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 FBP1P09467 338 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 ATP6V0CP27449 155 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 S100GP29377 79 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 P2RY1P47900 373 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 CYB561P49447 251 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 SULT1A1P50225 295 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 SPIN2AQ99865 258 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 SPIN2BQ9BPZ2 258 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 CACFD1Q9UGQ2 172 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 LIPGQ9Y5X9 500 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 ZFP92A6NM28 416 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 ZNF727A8MUV8 499 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 TAGLN2P37802 199 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 SNCAP37840 140 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 RHBDD1Q8TEB9 315 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 TCEAL3Q969E4 200 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 INTS12Q96CB8 462 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 WNT5BQ9H1J7 359 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 ANAPC10Q9UM13 185 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 IAPPP10997 89 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 DTYMKP23919 212 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 RBM11P57052 281 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 ZNF154Q13106 437 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 PRDX4Q13162 271 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 ZNF266Q14584 549 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 MYPOPQ86VE0 399 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 ZNF100Q8IYN0 542 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 PSMF1Q92530 271 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 LRFN1Q9P244 771 aa11.14□□□□□ -0.63
HMGCS1-201ENST00000325110 COLCA2A8K830 154 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 ETV2O00321 342 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 SLC34A2O95436 690 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 PDGFBP01127 241 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 IL11RAQ14626 422 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 ACER2Q5QJU3 275 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 CRIP3Q6Q6R5 217 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 CPT1CQ8TCG5 803 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 THOC3Q96J01 351 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 SLC35B3Q9H1N7 401 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 IFT22Q9H7X7 185 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 GPR35Q9HC97 309 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 A0A1W2PPE3 182 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 KLF7O75840 302 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 CST2P09228 141 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 CTSSP25774 331 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 DYNLT3P51808 116 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 PLP2Q04941 152 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 TMEM267Q0VDI3 215 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 GPR157Q5UAW9 335 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 LCN15Q6UWW0 184 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 WDR5BQ86VZ2 330 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 OR1J1Q8NGS3 322 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms