RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 OCIAD1Q9NX40 245 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 SLC7A11Q9UPY5 501 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 URB1O60287 2271 aaKnown RBP10.54□□□□□ -0.72
SEC24A-201ENST00000322887 A0A1W2PQD3 144 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 SNRPCP09234 159 aaKnown RBP10.54□□□□□ -0.72
SEC24A-201ENST00000322887 ZNF728P0DKX0 622 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 EWSR1Q01844 656 aaKnown RBP eCLIP10.54□□□□□ -0.72
SEC24A-201ENST00000322887 RHBDD2Q6NTF9 364 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 GINS3Q9BRX5 216 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 ZNF160Q9HCG1 818 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 SLC2A9Q9NRM0 540 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 GLRX2Q9NS18 164 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 DMRT1Q9Y5R6 373 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 LOC400499M0QZD8 3231 aa10.54□□□□□ -0.72
SEC24A-201ENST00000322887 VSTM2BA6NLU5 285 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 E5RGE8 158 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 K7N7A8 449 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 HSD17B6O14756 317 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 IFNA17P01571 189 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 CHATP28329 748 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 RSU1Q15404 277 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 LRP11Q86VZ4 500 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 ZNF441Q8N8Z8 693 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 CA5BP1Q8WTZ4 195 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 FRZBQ92765 325 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 POM121Q96HA1 1249 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 GAR1Q9NY12 217 aaKnown RBP10.53□□□□□ -0.72
SEC24A-201ENST00000322887 FBLN5Q9UBX5 448 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 NSG2Q9Y328 171 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 RBFOX3A6NFN3 312 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 OR2J2O76002 312 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 TIAF1O95411 115 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 TMEM50AO95807 157 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 S100A2P29034 98 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 CDX1P47902 265 aaPredicted RBP10.53□□□□□ -0.72
SEC24A-201ENST00000322887 MTCP1P56278 107 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 LSM6P62312 80 aaKnown RBP10.53□□□□□ -0.72
SEC24A-201ENST00000322887 ZNF468Q5VIY5 522 aaPredicted RBP10.53□□□□□ -0.72
SEC24A-201ENST00000322887 ZNF880Q6PDB4 577 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 ABHD5Q8WTS1 349 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 SNX22Q96L94 193 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 SCGB3A2Q96PL1 93 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 ZNF385AQ96PM9 386 aaKnown RBP10.53□□□□□ -0.72
SEC24A-201ENST00000322887 UCN2Q96RP3 112 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 NAA60Q9H7X0 242 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 AKIRIN1Q9H9L7 192 aaPredicted RBP10.53□□□□□ -0.72
SEC24A-201ENST00000322887 P4HTMQ9NXG6 502 aa10.53□□□□□ -0.72
SEC24A-201ENST00000322887 SPENQ96T58 3664 aaKnown RBP10.53□□□□□ -0.72
SEC24A-201ENST00000322887 IGHG1P01857 330 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 CTSDP07339 412 aaPredicted RBP10.52□□□□□ -0.72
SEC24A-201ENST00000322887 CD55P08174 381 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 CELA2AP08217 269 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 CD63P08962 238 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 SEC11BP0C7V7 166 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 RAB5CP51148 216 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 FGF8P55075 233 aaPredicted RBP10.52□□□□□ -0.72
SEC24A-201ENST00000322887 DCAF12Q5T6F0 453 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 DDIT4LQ96D03 193 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 WFIKKN1Q96NZ8 548 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 TCEAL7Q9BRU2 100 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 ARV1Q9H2C2 271 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 CRLF2Q9HC73 371 aa10.52□□□□□ -0.72
SEC24A-201ENST00000322887 BORCS7-ASMTA0A0B4J1R7 106 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 A0A1B0GX78 115 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 GPR137BO60478 399 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 TRGC1P0CF51 173 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 CCL4P13236 92 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 ZNF154Q13106 437 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 RHEBQ15382 184 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 DOK3Q7L591 496 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 ZNF429Q86V71 674 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 ODF3L1Q8IXM7 274 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 TMEM234Q8WY98 164 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 MSI2Q96DH6 328 aaKnown RBP10.52□□□□□ -0.73
SEC24A-201ENST00000322887 RBM24Q9BX46 236 aaKnown RBP10.52□□□□□ -0.73
SEC24A-201ENST00000322887 KCNIP3Q9Y2W7 256 aa10.52□□□□□ -0.73
SEC24A-201ENST00000322887 DSPP15924 2871 aaKnown RBP10.52□□□□□ -0.73
SEC24A-201ENST00000322887 IGKV1-12A0A0C4DH73 117 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 TRBV11-1A0A0K0K1C0 115 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 BLACEA4D250 179 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 ANKUB1A6NFN9 424 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 SCRG1O75711 98 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 SCGNO76038 276 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 IGKV1D-12P01611 117 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 PGA5P0DJD9 388 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 UCP2P55851 309 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 ZP4Q12836 540 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 PRSS8Q16651 343 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 TMEM164Q5U3C3 297 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 WDR25Q64LD2 544 aaPredicted RBP10.51□□□□□ -0.73
SEC24A-201ENST00000322887 OR2T2Q6IF00 324 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 ZNF610Q8N9Z0 462 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 NECAP1Q8NC96 275 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 OR5C1Q8NGR4 320 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 VSIRQ9H7M9 311 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 TREM2Q9NZC2 230 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 PPP4R1LQ9P1A2 415 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 NOSIPQ9Y314 301 aaKnown RBP10.51□□□□□ -0.73
SEC24A-201ENST00000322887 HLA-HP01893 362 aa10.51□□□□□ -0.73
SEC24A-201ENST00000322887 SRP19P09132 144 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms