RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ARHGAP21Q5T5U3 1957 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 SYT7O43581 403 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 ADAP1O75689 374 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 IGLV3-1P01715 115 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 IGHV3-9P01782 118 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 HLA-AP01891 365 aaKnown RBP11.32□□□□□ -0.6
CPNE1-201ENST00000317677 SFTPBP07988 381 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 PATE4P0C8F1 98 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 B4GALT1P15291 398 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 GRB2P62993 217 aaKnown RBP11.32□□□□□ -0.6
CPNE1-201ENST00000317677 CLINT1Q14677 625 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 SLC10A1Q14973 349 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 CEACAM16Q2WEN9 425 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 ZNF529Q6P280 563 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 TMED4Q7Z7H5 227 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 TUSC5Q8IXB3 177 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 GPR137CQ8N3F9 429 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 BPIFB2Q8N4F0 458 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 ZNF283Q8N7M2 679 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 HPSE2Q8WWQ2 592 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 DCUN1D4Q92564 292 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 PRORYQ9H606 182 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 MOB1AQ9H8S9 216 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 ZDHHC11Q9H8X9 412 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 GPR84Q9NQS5 396 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 DNAJB11Q9UBS4 358 aa11.32□□□□□ -0.6
CPNE1-201ENST00000317677 M0R036 132 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 SERPINA5P05154 406 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 FGF7P21781 194 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 CCL1P22362 96 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 CRYGSP22914 178 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 FOXG1P55316 489 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-201ENST00000317677 COTL1Q14019 142 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 DEFB109BQ30KR1 87 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 KHDC3LQ587J8 217 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 RIPPLY2Q5TAB7 128 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 ZNF585AQ6P3V2 769 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 ZDHHC22Q8N966 263 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 WDYHV1Q96HA8 205 aa11.31□□□□□ -0.6
CPNE1-201ENST00000317677 CCSO14618 274 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 DVL1O14640 695 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 OR2C1O95371 312 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 ARG1P05089 322 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 CST2P09228 141 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 RPS10P46783 165 aaKnown RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 RAB11BQ15907 218 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 C2orf76Q3KRA6 126 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 ZSCAN4Q8NAM6 433 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 TMEM178AQ8NBL3 297 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 OR10AD1Q8NGE0 317 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 RNASEH2CQ8TDP1 164 aaKnown RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 FAM3DQ96BQ1 224 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 RRNAD1Q96FB5 475 aaKnown RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 FOXB1Q99853 325 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 SIRT7Q9NRC8 400 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 SLC7A10Q9NS82 523 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 NBEAQ8NFP9 2946 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 F5H5K5 113 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 SYNGR3O43761 229 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 DAOP14920 347 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 ZNF32P17041 273 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 IL2RGP31785 369 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 GUCA1AP43080 201 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 RPS23P62266 143 aaKnown RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 JOSD1Q15040 202 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 UBE2V2Q15819 145 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 C1orf100Q5SVJ3 147 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 GLYATL3Q5SZD4 288 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 OR2A2Q6IF42 318 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 ZNF774Q6NX45 483 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 ABHD12BQ7Z5M8 362 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 OR4D6Q8NGJ1 314 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 OR13C8Q8NGS7 320 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 OR14K1Q8NGZ2 314 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 TERB2Q8NHR7 220 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 MUCL1Q96DR8 90 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 FAM71F1Q96KD3 344 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 SMDT1Q9H4I9 107 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 CALHM2Q9HA72 323 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 PLEK2Q9NYT0 353 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 GOLT1BQ9Y3E0 138 aa11.3□□□□□ -0.6
CPNE1-201ENST00000317677 SPENQ96T58 3664 aaKnown RBP11.3□□□□□ -0.6
CPNE1-201ENST00000317677 TRAV18A0A075B6X5 111 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 TRGV5A0A0B4J1U4 118 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 LDLRAD4O15165 306 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 HIST1H2BKO60814 126 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 CEACAM4O75871 244 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 DUS4LO95620 317 aaKnown RBP11.29□□□□□ -0.6
CPNE1-201ENST00000317677 HIST1H2BJP06899 126 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 METTL15P1P0C7V9 234 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 HIST1H2BOP23527 126 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 HIST1H2BBP33778 126 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 SNCAP37840 140 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 HIST1H2BDP58876 126 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 HIST1H2BCP62807 126 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 MEF2DQ14814 521 aa11.29□□□□□ -0.6
CPNE1-201ENST00000317677 HIST2H2BEQ16778 126 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms