RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MICU1Q9BPX6 476 aa12.18□□□□□ -0.46
VRK3-201ENST00000316763 TMEM100Q9NV29 134 aa12.18□□□□□ -0.46
VRK3-201ENST00000316763 PCDHB10Q9UN67 800 aa12.18□□□□□ -0.46
VRK3-201ENST00000316763 SPTA1P02549 2419 aa12.18□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A10PA6NDY2 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A18PA6NE21 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A16PA6NEW6 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A20PA6NIJ5 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A8PA6NJQ4 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A7PA6NKC0 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A22PA8MWA6 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A12PA8MX19 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A5PA8MXJ8 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A23PA8MXZ1 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A15PP0C7V4 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A13PP0C7W8 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A14PP0C7W9 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 FAM90A24PP0C7X0 464 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 KRTCAP3Q53RY4 240 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 TFAP2EQ6VUC0 442 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 BPIFCQ8NFQ6 507 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 OR1S2Q8NGQ3 325 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 WNT2BQ93097 391 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 TOMM40LQ969M1 308 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 ARL11Q969Q4 196 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 BBC3Q96PG8 261 aaPredicted RBP12.17□□□□□ -0.46
VRK3-201ENST00000316763 TRIB1Q96RU8 372 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 SYT3Q9BQG1 590 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 SUCNR1Q9BXA5 334 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 C12orf4Q9NQ89 552 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 MSGN1A6NI15 193 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 MSTNO14793 375 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 TSPAN4O14817 238 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 TPD52L2O43399 206 aaKnown RBP12.17□□□□□ -0.46
VRK3-201ENST00000316763 ARR3P36575 388 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
VRK3-201ENST00000316763 GGNBP1Q5YKI7 109 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 MRPL21Q7Z2W9 205 aaKnown RBP12.17□□□□□ -0.46
VRK3-201ENST00000316763 TMEM200AQ86VY9 491 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 ZNF611Q8N823 705 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 SPERTQ8NA61 448 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 NARS2Q96I59 477 aaKnown RBP12.17□□□□□ -0.46
VRK3-201ENST00000316763 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
VRK3-201ENST00000316763 PAPOLGQ9BWT3 736 aaKnown RBP12.17□□□□□ -0.46
VRK3-201ENST00000316763 SLC5A7Q9GZV3 580 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 ZNF442Q9H7R0 627 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 NAA60Q9H7X0 242 aa12.17□□□□□ -0.46
VRK3-201ENST00000316763 KMT2BQ9UMN6 2715 aaPredicted RBP12.17□□□□□ -0.46
VRK3-201ENST00000316763 A0A096LPE4 126 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 A0A1W2PPZ6 126 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 CD79AP11912 226 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 CCNOP22674 350 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 FCGR2CP31995 323 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 TDGF1P3P51864 188 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 UCP3P55916 312 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 SLC25A26Q70HW3 274 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 P4HA3Q7Z4N8 544 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 ZGRF1Q86YA3 2104 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 SAXO1Q8IYX7 474 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 CCDC71LQ8N9Z2 235 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 BHLHE23Q8NDY6 225 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 OR56B2PQ8NGI1 322 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 TMED6Q8WW62 240 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 APOBEC3DQ96AK3 386 aaPredicted RBP12.16□□□□□ -0.46
VRK3-201ENST00000316763 GALNT14Q96FL9 552 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 ZNF581Q9P0T4 197 aa12.16□□□□□ -0.46
VRK3-201ENST00000316763 C5orf49A4QMS7 147 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 K7EPK0 472 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 OR7C1O76099 320 aaPredicted RBP12.15□□□□□ -0.46
VRK3-201ENST00000316763 FXYD4P59646 89 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 HERV-K104P61576 105 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 PXDC1Q5TGL8 231 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 C9orf135Q5VTT2 229 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 BRICD5Q6PL45 260 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 FOXRED2Q8IWF2 684 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 FAM71E2Q8N5Q1 922 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 RTN4IP1Q8WWV3 396 aaPredicted RBP12.15□□□□□ -0.46
VRK3-201ENST00000316763 DYRK2Q92630 601 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 MS4A7Q9GZW8 240 aaPredicted RBP12.15□□□□□ -0.46
VRK3-201ENST00000316763 OPA3Q9H6K4 179 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 OR2S2Q9NQN1 319 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 ZFP57Q9NU63 452 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 FBXO9Q9UK97 447 aaPredicted RBP12.15□□□□□ -0.46
VRK3-201ENST00000316763 STARD10Q9Y365 291 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 SHANK1Q9Y566 2161 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 PQLC2LA1A4F0 135 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 DEDDO75618 318 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 HKR1P10072 659 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 RPL12P30050 165 aaKnown RBP12.15□□□□□ -0.46
VRK3-201ENST00000316763 DEFA5Q01523 94 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 PLP2Q04941 152 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 PRDX4Q13162 271 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 TMEM187Q14656 261 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 FBXW9Q5XUX1 488 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 FAM214BQ7L5A3 538 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 CALHM1Q8IU99 346 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 ZDHHC23Q8IYP9 409 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 Q8NFD4 153 aa12.15□□□□□ -0.46
VRK3-201ENST00000316763 LHFPL5Q8TAF8 219 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms