RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 PFDN2Q9UHV9 154 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 TUBD1Q9UJT1 453 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 F8VVB4 439 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 F8VWA3 439 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 WDR1O75083 606 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 CGAP01215 116 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 PPYP01298 95 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 RLN2P04090 185 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 EIF5AP63241 154 aaKnown RBP11.89□□□□□ -0.51
VAMP2-201ENST00000316509 LGI3Q8N145 548 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 SUMF2Q8NBJ7 301 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 BHLHE23Q8NDY6 225 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 DYRK2Q92630 601 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 MARS2Q96GW9 593 aaKnown RBP11.89□□□□□ -0.51
VAMP2-201ENST00000316509 OR10C1Q96KK4 312 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 AQP10Q96PS8 301 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 OR2J1Q9GZK6 312 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 FBXO9Q9UK97 447 aaPredicted RBP11.89□□□□□ -0.51
VAMP2-201ENST00000316509 PCDHB10Q9UN67 800 aa11.89□□□□□ -0.51
VAMP2-201ENST00000316509 WDFY3Q8IZQ1 3526 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 FAM221AA4D161 298 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 TAAR5O14804 337 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 DEGS1O15121 323 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 IGLV1-44P01699 117 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 P2RX3P56373 397 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 ERVK11-1P61568 191 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 PDCD1Q15116 288 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 C3orf36Q3SXR2 165 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 KRTCAP3Q53RY4 240 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 ALKAL2Q6UX46 152 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 LIAT1Q6ZQX7 453 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 MOB1BQ7L9L4 216 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 TOMM40LQ969M1 308 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF71Q9NQZ8 489 aaPredicted RBP11.88□□□□□ -0.51
VAMP2-201ENST00000316509 RASL12Q9NYN1 266 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 DKK4Q9UBT3 224 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF407Q9C0G0 2248 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 RTTNQ86VV8 2226 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 hCG_1807616A0A1W2PRN6 198 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 PDGFAP04085 211 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 CELA3BP08861 270 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 HOXB5P09067 269 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 AADACP22760 399 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 MZT1Q08AG7 82 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 AANATQ16613 207 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF585AQ6P3V2 769 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 VWA1Q6PCB0 445 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 FIP1L1Q6UN15 594 aaKnown RBP11.88□□□□□ -0.51
VAMP2-201ENST00000316509 OR4A4PQ8NGN8 299 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 NEK7Q8TDX7 302 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 STARD4Q96DR4 205 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 CNTNAP3BQ96NU0 1288 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF471Q9BX82 626 aaPredicted RBP11.88□□□□□ -0.51
VAMP2-201ENST00000316509 CNTNAP3Q9BZ76 1288 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 DNTTIP1Q9H147 329 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 SLC2A9Q9NRM0 540 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 TMEM100Q9NV29 134 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 SESN1Q9Y6P5 492 aa11.88□□□□□ -0.51
VAMP2-201ENST00000316509 FREM1Q5H8C1 2179 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 MUC6Q6W4X9 2439 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 F5H0A9 414 aaPredicted RBP11.87□□□□□ -0.51
VAMP2-201ENST00000316509 SHOXO15266 292 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 LILRA1O75019 489 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 TNFSF13O75888 250 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 TUSC2O75896 110 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 SPDEFO95238 335 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 KITLGP21583 273 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 PSG7Q13046 419 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 IAH1Q2TAA2 248 aaPredicted RBP11.87□□□□□ -0.51
VAMP2-201ENST00000316509 SPIN3Q5JUX0 258 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 GGNBP1Q5YKI7 109 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 EIF4E3Q8N5X7 224 aaKnown RBP11.87□□□□□ -0.51
VAMP2-201ENST00000316509 OR8G5Q8NG78 346 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
VAMP2-201ENST00000316509 SHARPINQ9H0F6 387 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 TMED3Q9Y3Q3 217 aa11.87□□□□□ -0.51
VAMP2-201ENST00000316509 H0YIZ8 118 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 TPT1P13693 172 aaKnown RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 KCNJ3P48549 501 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 FXYD4P59646 89 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 ATXN7L3Q14CW9 347 aaPredicted RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF146Q15072 292 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 OR8G1Q15617 311 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 Q6P435 159 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 Q6ZPA2 131 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 BHLHA15Q7RTS1 189 aaPredicted RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 LDLRAD3Q86YD5 345 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF565Q8N9K5 539 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 SCCPDHQ8NBX0 429 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 MRPL30Q8TCC3 161 aaKnown RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 KLF14Q8TD94 323 aaPredicted RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 RBPMSQ93062 196 aaKnown RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 C18orf12Q96KH6 178 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 ADAT1Q9BUB4 502 aaKnown RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 OR51B6Q9H340 312 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 GLS2Q9UI32 602 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 DNAJC13O75165 2243 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 TRAV24A0A0B4J272 114 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms