RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 RIPPLY2Q5TAB7 128 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 LFNGQ8NES3 379 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 SLC25A28Q96A46 364 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 OR5B12Q96R08 314 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 SHARPINQ9H0F6 387 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 SMCO4Q9NRQ5 59 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 IL17BQ9UHF5 180 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 CACNA1DQ01668 2161 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 LNP1A1A4G5 178 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 IFNA10P01566 189 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 IFNA4P05014 189 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 MPGP29372 298 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 PJVKQ0ZLH3 352 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 MS4A7Q9GZW8 240 aaPredicted RBP11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 SEMA5BQ9P283 1151 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 IGLV3-32A0A0A0MS00 114 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 WISP1O95388 367 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 PTGER4P35408 488 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 NOVA1P51513 510 aaKnown RBP11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 ELLP55199 621 aaPredicted RBP11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 RBM11P57052 281 aaKnown RBP11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 BAXQ07812 192 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 OR8B8Q15620 311 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 UQCC3Q6UW78 93 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 LIAT1Q6ZQX7 453 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 LYZL2Q7Z4W2 148 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 GNPNAT1Q96EK6 184 aaPredicted RBP11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 C5orf66Q9H5L9 145 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 SLC2A8Q9NY64 477 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 SPAARA0A1B0GVQ0 90 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 ZFP92A6NM28 416 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 M0R1B8 84 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 MFNGO00587 321 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 COL19A1Q14993 1142 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 HAGHQ16775 308 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 ALKBH6Q3KRA9 238 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 PHYHD1Q5SRE7 291 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 Q8IYB0 196 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 SLC39A9Q9NUM3 307 aa11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 STRAPQ9Y3F4 350 aaKnown RBP11.66□□□□□ -0.54
PCDHB9-201ENST00000316105 MED19A0JLT2 244 aaPredicted RBP11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 KLF7O75840 302 aaPredicted RBP11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 SUCLG1P53597 346 aaKnown RBP11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 DEFB108BQ8NET1 73 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 FOXJ2Q9P0K8 574 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 ZNF319Q9P2F9 582 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 COL4A3Q01955 1670 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 A0A1W2PPV4 95 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 FAM24AA6NFZ4 105 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 NFYBP25208 207 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 TGIF1Q15583 401 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 TMEM211Q6ICI0 200 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 IL34Q6ZMJ4 242 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 SLC16A13Q7RTY0 426 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 THNSL2Q86YJ6 484 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 OR10AD1Q8NGE0 317 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 OR11L1Q8NGX0 322 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 WNT5BQ9H1J7 359 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 MMP26Q9NRE1 261 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 RASL12Q9NYN1 266 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 KIAA1549LQ6ZVL6 1849 aa11.65□□□□□ -0.54
PCDHB9-201ENST00000316105 NGFP01138 241 aa11.65□□□□□ -0.55
PCDHB9-201ENST00000316105 RPP30P78346 268 aaKnown RBP11.65□□□□□ -0.55
PCDHB9-201ENST00000316105 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.55
PCDHB9-201ENST00000316105 MIDNQ504T8 468 aa11.65□□□□□ -0.55
PCDHB9-201ENST00000316105 TBC1D26Q86UD7 250 aa11.65□□□□□ -0.55
PCDHB9-201ENST00000316105 ZNF488Q96MN9 340 aa11.65□□□□□ -0.55
PCDHB9-201ENST00000316105 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.55
PCDHB9-201ENST00000316105 ZNF724A8MTY0 619 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 UMAD1C9J7I0 102 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 RNASEK-C17orf49H0YIS7 233 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 MPPED1O15442 326 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 SP9P0CG40 484 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 POLR2GP62487 172 aaKnown RBP eCLIP11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 KCNMB1Q16558 191 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 FBXW9Q5XUX1 488 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 C17orf78Q8N4C9 275 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 GALMQ96C23 342 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 DYNLRB1Q9NP97 96 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 TRAV39A0A0B4J263 110 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 PDLIM3Q53GG5 364 aaPredicted RBP11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 OR2C3Q8N628 320 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 OR4A16Q8NH70 328 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 NUDT16L1Q9BRJ7 211 aaKnown RBP11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 TAAR3PQ9P1P4 343 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 NPTNQ9Y639 398 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 DHRS7CA6NNS2 312 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 ACP1P24666 158 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 RAB31Q13636 194 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 ANKRD55Q3KP44 614 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 OR2A2Q6IF42 318 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 MDP1Q86V88 176 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 OR5A2Q8NGI9 324 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 AKR1E2Q96JD6 320 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 Q96M66 194 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 NIPSNAP3BQ9BS92 247 aa11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 HEYLQ9NQ87 328 aaPredicted RBP11.64□□□□□ -0.55
PCDHB9-201ENST00000316105 CDIPTO14735 213 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms