RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 CARD18P57730 90 aa12.9□□□□□ -0.34
TFE3-201ENST00000315869 EWSR1Q01844 656 aaKnown RBP eCLIP12.9□□□□□ -0.34
TFE3-201ENST00000315869 CRIP3Q6Q6R5 217 aa12.9□□□□□ -0.34
TFE3-201ENST00000315869 NCOR2Q9Y618 2525 aa12.9□□□□□ -0.34
TFE3-201ENST00000315869 IGLV3-12A0A075B6K2 115 aa12.9□□□□□ -0.35
TFE3-201ENST00000315869 IGKV1-12A0A0C4DH73 117 aa12.9□□□□□ -0.35
TFE3-201ENST00000315869 YIF1AO95070 293 aa12.9□□□□□ -0.35
TFE3-201ENST00000315869 VAMP5O95183 116 aa12.9□□□□□ -0.35
TFE3-201ENST00000315869 IGKV1D-12P01611 117 aa12.9□□□□□ -0.35
TFE3-201ENST00000315869 CCL20P78556 96 aa12.9□□□□□ -0.35
TFE3-201ENST00000315869 KCNMB1Q16558 191 aa12.9□□□□□ -0.35
TFE3-201ENST00000315869 CXorf66Q5JRM2 361 aaPredicted RBP12.9□□□□□ -0.35
TFE3-201ENST00000315869 OR5C1Q8NGR4 320 aa12.9□□□□□ -0.35
TFE3-201ENST00000315869 LIPGQ9Y5X9 500 aa12.9□□□□□ -0.35
TFE3-201ENST00000315869 A0A096LPE4 126 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 A0A1W2PPZ6 126 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 C9J4A7 227 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 IFNA17P01571 189 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 ATP6V0CP27449 155 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 NPBWR2P48146 333 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 ZNF92Q03936 586 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 HGFACQ04756 655 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 AKR1C8PQ5T2L2 129 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 PRR18Q8N4B5 295 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 NAT6Q93015 286 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 SRXN1Q9BYN0 137 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 CHD8Q9HCK8 2581 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 ADAM20O43506 726 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
TFE3-201ENST00000315869 OTX2P32243 289 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 TLE1Q04724 770 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 HIST3H3Q16695 136 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 NABP1Q96AH0 204 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 STARD10Q9Y365 291 aa12.89□□□□□ -0.35
TFE3-201ENST00000315869 C3orf85A0A1B0GTC6 90 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 ZNF724A8MTY0 619 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 PPYP01298 95 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 MPLP40238 635 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 GPR157Q5UAW9 335 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 TMEM123Q8N131 208 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 ZNF611Q8N823 705 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 OR51H1Q8NH63 302 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 SSC4DQ8WTU2 575 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 IL1F10Q8WWZ1 152 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 SLC7A10Q9NS82 523 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 H7C1Q1 480 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 PDCD6O75340 191 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 TK1P04183 234 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 DPPA2Q7Z7J5 298 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 UBALD1Q8TB05 177 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 GSN-AS1Q9NRJ2 163 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 C5orf52A6NGY3 159 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 FOXI3A8MTJ6 420 aaPredicted RBP12.88□□□□□ -0.35
TFE3-201ENST00000315869 M0R296 226 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 MSTNO14793 375 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 RAB35Q15286 201 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 FAM209BQ5JX69 171 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 ZNF468Q5VIY5 522 aaPredicted RBP12.88□□□□□ -0.35
TFE3-201ENST00000315869 ZNF343Q6P1L6 599 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 LHFPL2Q6ZUX7 228 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 C17orf78Q8N4C9 275 aa12.88□□□□□ -0.35
TFE3-201ENST00000315869 CPNE4Q96A23 557 aaPredicted RBP12.88□□□□□ -0.35
TFE3-201ENST00000315869 H0YL77 283 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 MPPED1O15442 326 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 HLA-HP01893 362 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 DSCR4P56555 118 aaPredicted RBP12.87□□□□□ -0.35
TFE3-201ENST00000315869 RAB2AP61019 212 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 EXTL1Q92935 676 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 ZNF251Q9BRH9 671 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 STRAPQ9Y3F4 350 aaKnown RBP12.87□□□□□ -0.35
TFE3-201ENST00000315869 C3orf80F5H4A9 247 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 RRP8O43159 456 aaKnown RBP12.87□□□□□ -0.35
TFE3-201ENST00000315869 P04436 131 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 SMIM6P0DI80 62 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 LIFP15018 202 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 FUT3P21217 361 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 ALDH3B1P43353 468 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 CTAG1AP78358 180 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 ZNF266Q14584 549 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 IL13RA2Q14627 380 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 IZUMO4Q1ZYL8 232 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 WIPI1Q5MNZ9 446 aaPredicted RBP12.87□□□□□ -0.35
TFE3-201ENST00000315869 FAM27BQ5VT28 67 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 NSUN5P2Q63ZY6 315 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 TBC1D26Q86UD7 250 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 CALHM1Q8IU99 346 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 AGBL5Q8NDL9 886 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 FOXB1Q99853 325 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 SEMA5BQ9P283 1151 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 IGHV3-64DA0A0J9YX35 117 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 ZIC3O60481 467 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 DTYMKP23919 212 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 S100A2P29034 98 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 MRPS34P82930 218 aaKnown RBP12.87□□□□□ -0.35
TFE3-201ENST00000315869 PSG4Q00888 419 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 TSC22D1Q15714 1073 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 HIST2H3AQ71DI3 136 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 FGFBP3Q8TAT2 258 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 ZDHHC8Q9ULC8 765 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms