RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 CCL13Q99616 98 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 TMUB2Q71RG4 321 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 LYG2Q86SG7 212 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 OR5B3Q8NH48 314 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 BLNKQ8WV28 456 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 LHX4Q969G2 390 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 ZNF764Q96H86 408 aaPredicted RBP11.82□□□□□ -0.52
RFFL-201ENST00000315249 DIRC2Q96SL1 478 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 EXOGQ9Y2C4 368 aaKnown RBP11.82□□□□□ -0.52
RFFL-201ENST00000315249 FFAR1O14842 300 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 ZBTB37Q5TC79 503 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 NCCRP1Q6ZVX7 275 aaPredicted RBP11.82□□□□□ -0.52
RFFL-201ENST00000315249 JTBO76095 146 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 GFRA1P56159 465 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 COL10A1Q03692 680 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 WFDC3Q8IUB2 231 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 PXT1Q8NFP0 134 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 C2orf50Q96LR7 162 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 PATZ1Q9HBE1 687 aaKnown RBP11.82□□□□□ -0.52
RFFL-201ENST00000315249 KIF26BQ2KJY2 2108 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 CHEK1O14757 476 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 ORM2P19652 201 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 COX5AP20674 150 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 ADAM19Q9H013 955 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.82□□□□□ -0.52
RFFL-201ENST00000315249 URGCP-MRPS24S4R325 110 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 A0A0A6YYJ9 748 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 LYZP61626 148 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 OR2F1Q13607 317 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 PIGYQ3MUY2 71 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 ZNF658BQ4V348 819 aaPredicted RBP11.81□□□□□ -0.52
RFFL-201ENST00000315249 SLC51BQ86UW2 128 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 AKIRIN1Q9H9L7 192 aaPredicted RBP11.81□□□□□ -0.52
RFFL-201ENST00000315249 TUBG2Q9NRH3 451 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 FRRS1LQ9P0K9 344 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 PPP1R32Q7Z5V6 425 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 RNF24Q9Y225 148 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 SMIM18P0DKX4 95 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 GNPNAT1Q96EK6 184 aaPredicted RBP11.81□□□□□ -0.52
RFFL-201ENST00000315249 A0A1W2PPE3 182 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 SLC31A2O15432 143 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 BATFQ16520 125 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 BAGE2Q86Y30 109 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 OR4S2Q8NH73 311 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 VWCEQ96DN2 955 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 ZNF331Q9NQX6 463 aaPredicted RBP11.81□□□□□ -0.52
RFFL-201ENST00000315249 XKRY2A2RUG3 117 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 HIST2H3AQ71DI3 136 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 MUC20Q8N307 709 aaPredicted RBP11.81□□□□□ -0.52
RFFL-201ENST00000315249 GPR27Q9NS67 375 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 MS4A18H0YCH9 400 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 DCTN6O00399 190 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 LANCL1O43813 399 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 MS4A18Q3C1V0 323 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 TIGITQ495A1 244 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 FNDC7Q5VTL7 733 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 OR5A2Q8NGI9 324 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 ITLN1Q8WWA0 313 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 SPSB2Q99619 263 aa11.81□□□□□ -0.52
RFFL-201ENST00000315249 PSG4Q00888 419 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 TMEM128Q5BJH2 165 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 OR4F17Q8NGA8 305 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 ZNF488Q96MN9 340 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 TMEM210A6NLX4 147 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 MBP02144 154 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 GVQW1Q8N7I0 195 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 RPUSD4Q96CM3 377 aaKnown RBP11.8□□□□□ -0.52
RFFL-201ENST00000315249 LSM2Q9Y333 95 aaKnown RBP11.8□□□□□ -0.52
RFFL-201ENST00000315249 STARD10Q9Y365 291 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 CCL27Q9Y4X3 112 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 NBASA2RRP1 2371 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 ZNF705GA8MUZ8 300 aaPredicted RBP11.8□□□□□ -0.52
RFFL-201ENST00000315249 TRDCB7Z8K6 153 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 RRASP10301 218 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 ERGP11308 486 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 SLC7A5P1Q8MH63 180 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 NECAP1Q8NC96 275 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 TP53BP1Q12888 1972 aaPredicted RBP11.8□□□□□ -0.52
RFFL-201ENST00000315249 IGHV3OR16-10A0A075B7F0 116 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 DUS4LO95620 317 aaKnown RBP11.8□□□□□ -0.52
RFFL-201ENST00000315249 SFXN3Q9BWM7 321 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 GAMTQ14353 236 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 SKA3Q8IX90 412 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 DRAXINQ8NBI3 349 aaPredicted RBP11.8□□□□□ -0.52
RFFL-201ENST00000315249 OR1B1Q8NGR6 318 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 ZNF519Q8TB69 540 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 PECRQ9BY49 303 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 MPDZO75970 2070 aa11.8□□□□□ -0.52
RFFL-201ENST00000315249 C3orf85A0A1B0GTC6 90 aa11.79□□□□□ -0.52
RFFL-201ENST00000315249 KRBOX1C9JBD0 128 aa11.79□□□□□ -0.52
RFFL-201ENST00000315249 CBR1P16152 277 aa11.79□□□□□ -0.52
RFFL-201ENST00000315249 GZMHP20718 246 aa11.79□□□□□ -0.52
RFFL-201ENST00000315249 PRDX2P32119 198 aa11.79□□□□□ -0.52
RFFL-201ENST00000315249 HMGA2P52926 109 aa11.79□□□□□ -0.52
RFFL-201ENST00000315249 MMDQ15546 238 aa11.79□□□□□ -0.52
RFFL-201ENST00000315249 SVBPQ8N300 66 aa11.79□□□□□ -0.52
RFFL-201ENST00000315249 ATPIF1Q9UII2 106 aa11.79□□□□□ -0.52
RFFL-201ENST00000315249 SF3B6Q9Y3B4 125 aaKnown RBP11.79□□□□□ -0.52
RFFL-201ENST00000315249 V9GYS6 101 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms