RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CLEC18BQ6UXF7 455 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 NANPQ8TBE9 248 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 GLYATL2Q8WU03 294 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 SFT2D1Q8WV19 159 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 MITD1Q8WV92 249 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 SPSB4Q96A44 273 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 APOBEC3DQ96AK3 386 aaPredicted RBP10.67□□□□□ -0.7
RNF4-201ENST00000314289 ZNF442Q9H7R0 627 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 RNF122Q9H9V4 155 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 ZFP57Q9NU63 452 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 ROS1P08922 2347 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 AGPAT2O15120 278 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 SYNGR1O43759 233 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 SELEP16581 610 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 TBPP20226 339 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 CHATP28329 748 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 APLNRP35414 380 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 SUPT4H1P63272 117 aaKnown RBP10.67□□□□□ -0.7
RNF4-201ENST00000314289 FAM189A2Q15884 450 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 Q6ZPA2 131 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 TMEM200AQ86VY9 491 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 ARRDC1Q8N5I2 433 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 ANAPC10Q9UM13 185 aa10.67□□□□□ -0.7
RNF4-201ENST00000314289 EIF3GO75821 320 aaKnown RBP eCLIP10.66□□□□□ -0.7
RNF4-201ENST00000314289 CA6P23280 308 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 CD82P27701 267 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 FOXF2Q12947 444 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 DAZAP2Q15038 168 aaPredicted RBP10.66□□□□□ -0.7
RNF4-201ENST00000314289 ANKRD55Q3KP44 614 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 NRN1LQ496H8 165 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 VWA1Q6PCB0 445 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 SLC16A13Q7RTY0 426 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 BAP18Q8IXM2 172 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 C17orf78Q8N4C9 275 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 SLC30A7Q8NEW0 376 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 AGFG2O95081 481 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 PSMB6P28072 239 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 ARR3P36575 388 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 AKR1C3P42330 323 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 HOXA4Q00056 320 aaPredicted RBP10.66□□□□□ -0.7
RNF4-201ENST00000314289 TMEM128Q5BJH2 165 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 RNF141Q8WVD5 230 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 BCL2L2Q92843 193 aaPredicted RBP10.66□□□□□ -0.7
RNF4-201ENST00000314289 RRNAD1Q96FB5 475 aaKnown RBP10.66□□□□□ -0.7
RNF4-201ENST00000314289 TAAR6Q96RI8 345 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 UQCC1Q9NVA1 299 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 ZMAT5Q9UDW3 170 aaKnown RBP10.66□□□□□ -0.7
RNF4-201ENST00000314289 IL2RAP01589 272 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 CRHP06850 196 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 FCGR3AP08637 254 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 HOXB5P09067 269 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 IGHV1-2P23083 117 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 MPZP25189 248 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 TAS2R46P59540 309 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 SNRPEP62304 92 aaKnown RBP10.66□□□□□ -0.7
RNF4-201ENST00000314289 SLC22A25Q6T423 547 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 FOXRED2Q8IWF2 684 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 CCDC54Q8NEL0 328 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 DLL3Q9NYJ7 618 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 MTCH1Q9NZJ7 389 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 ANXA10Q9UJ72 324 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 ZNF391Q9UJN7 358 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 OSGIN2Q9Y236 505 aa10.66□□□□□ -0.7
RNF4-201ENST00000314289 CACNA1DQ01668 2161 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 MEX3AA1L020 520 aaKnown RBP10.65□□□□□ -0.7
RNF4-201ENST00000314289 FGF16O43320 207 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 DUS4LO95620 317 aaKnown RBP10.65□□□□□ -0.7
RNF4-201ENST00000314289 OR5H8P0DN80 308 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 SRSF4Q08170 494 aaKnown RBP10.65□□□□□ -0.7
RNF4-201ENST00000314289 ALKBH6Q3KRA9 238 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 ZNF585AQ6P3V2 769 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 ZDHHC23Q8IYP9 409 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 STOML3Q8TAV4 291 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 MYOZ1Q9NP98 299 aaPredicted RBP10.65□□□□□ -0.7
RNF4-201ENST00000314289 MSGN1A6NI15 193 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 LINC00587B1AMM8 73 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 K7EM74 188 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 RBM11P57052 281 aaKnown RBP10.65□□□□□ -0.7
RNF4-201ENST00000314289 SP6Q3SY56 376 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 ETV3LQ6ZN32 361 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 LHFPL1Q86WI0 220 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 C9orf106Q8NAJ2 232 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.65□□□□□ -0.7
RNF4-201ENST00000314289 GSKIPQ9P0R6 139 aa10.65□□□□□ -0.7
RNF4-201ENST00000314289 CARHSP1Q9Y2V2 147 aaKnown RBP10.65□□□□□ -0.7
RNF4-201ENST00000314289 PQLC2LA1A4F0 135 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 PRR33A8MZF0 331 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 ACAA1P09110 424 aaPredicted RBP10.64□□□□□ -0.71
RNF4-201ENST00000314289 ACTBL2Q562R1 376 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 IGSF11Q5DX21 431 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 RBMS3Q6XE24 437 aaKnown RBP10.64□□□□□ -0.71
RNF4-201ENST00000314289 RHBDL1O75783 438 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 MUC1P15941 1255 aaPredicted RBP10.64□□□□□ -0.71
RNF4-201ENST00000314289 FPR2P25090 351 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 NEK7Q8TDX7 302 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 GPHA2Q96T91 129 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 OR2J1Q9GZK6 312 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 METTL8Q9H825 291 aaKnown RBP10.64□□□□□ -0.71
RNF4-201ENST00000314289 RHOFQ9HBH0 211 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms