RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SLC35G3Q8N808 338 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 LRRC30A6NM36 301 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 MFNGO00587 321 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 MPPED1O15442 326 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 NKX6-1P78426 367 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 PLAC9Q5JTB6 97 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 RNF144BQ7Z419 303 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 ZIC4Q8N9L1 334 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 ZBTB44Q8NCP5 570 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 CXXC4Q9H2H0 198 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 LINC00052Q96N35 136 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 MSL2Q9HCI7 577 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 DICER1Q9UPY3 1922 aaKnown RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 ERVH48-1M5A8F1 160 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 FAM3AP98173 230 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 FAM185AQ8N0U4 392 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 OR10P1Q8NGE3 313 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 PURGQ9UJV8 347 aaKnown RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 HBE1P02100 147 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 RPP30P78346 268 aaKnown RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 ZNF703Q9H7S9 590 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 SLC2A9Q9NRM0 540 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 M0R1X1 148 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 PTGDSP41222 190 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 PI4KAP42356 2102 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 ALDH3B1P43353 468 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 OR10C1Q96KK4 312 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 PTPRFP10586 1907 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 HOXA6P31267 233 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 PJVKQ0ZLH3 352 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 HAGHQ16775 308 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 TMEM211Q6ICI0 200 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 INO80CQ6PI98 192 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 TBC1D26Q86UD7 250 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 GNPNAT1Q96EK6 184 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 MCM3APO60318 1980 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 HBG1P69891 147 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 HBG2P69892 147 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 SPINK9Q5DT21 86 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 BHLHA15Q7RTS1 189 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 C5orf63A6NC05 138 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 C17orf112F2Z3M2 114 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 PMELP40967 661 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 GPR12P47775 334 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 FOXG1P55316 489 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 UCP2P55851 309 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 SMIM21Q3B7S5 101 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 ZNF826PQ6ZT77 177 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 PAQR4Q8N4S7 273 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 HIPK2Q9H2X6 1198 aa5.36□□□□□ -1.55
PRKDC-201ENST00000314191 LIN7CQ9NUP9 197 aaKnown RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 TMEM267Q0VDI3 215 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-201ENST00000314191 CADP27708 2225 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 CST9LP1Q5W188 147 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 TMEM88Q6PEY1 159 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 Q8IYB0 196 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 OR5AC2Q9NZP5 309 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 STRAPQ9Y3F4 350 aaKnown RBP5.35□□□□□ -1.55
PRKDC-201ENST00000314191 C2orf68Q2NKX9 166 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 CEACAM21Q3KPI0 293 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 VAX1Q5SQQ9 334 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 OR2C3Q8N628 320 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 ERGIC1Q969X5 290 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 OR2D2Q9H210 308 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 BIN3Q9NQY0 253 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 WNK2Q9Y3S1 2297 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 ADAM5Q6NVV9 412 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 RXFP4Q8TDU9 374 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 MPV17LQ2QL34 196 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 C1orf87Q8N0U7 546 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 FGFBP3Q8TAT2 258 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 FN3KRPQ9HA64 309 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 KPTNQ9Y664 436 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 IGKV1-9A0A0C4DH69 117 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 IGLV3-32A0A0A0MS00 114 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 CD74P04233 296 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 IGFBP3P17936 291 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-201ENST00000314191 C2CD4CQ8TF44 421 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 LIPGQ9Y5X9 500 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 SCTP09683 121 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 ZNF883P0CG24 379 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 Q3ZCU0 254 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 FDCSPQ8NFU4 85 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 HPSE2Q8WWQ2 592 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 TREM2Q9NZC2 230 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 URGCP-MRPS24S4R325 110 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 CHST1O43916 411 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 SERTAD4Q9NUC0 356 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 LINC00862A6NCI5 91 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 CYB5BO43169 146 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 CYTIPO60759 359 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 AKR1C3P42330 323 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 OR10Z1Q8NGY1 313 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 SLC25A28Q96A46 364 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 NMBP08949 121 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 TNFAIP6P98066 277 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-201ENST00000314191 LAMTOR1Q6IAA8 161 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 OVCH2Q7RTZ1 564 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 OR1K1Q8NGR3 316 aa5.35□□□□□ -1.55
PRKDC-201ENST00000314191 OR5C1Q8NGR4 320 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms