RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 ZNF610Q8N9Z0 462 aa11.63□□□□□ -0.55
CCDC13-201ENST00000310232 SUCNR1Q9BXA5 334 aa11.63□□□□□ -0.55
CCDC13-201ENST00000310232 C8orf33Q9H7E9 229 aaPredicted RBP11.63□□□□□ -0.55
CCDC13-201ENST00000310232 SLC7A10Q9NS82 523 aa11.63□□□□□ -0.55
CCDC13-201ENST00000310232 DECR2Q9NUI1 292 aa11.63□□□□□ -0.55
CCDC13-201ENST00000310232 SPENQ96T58 3664 aaKnown RBP11.62□□□□□ -0.55
CCDC13-201ENST00000310232 IGKV1D-13A0A0B4J2D9 117 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 IGKV1-13P0DP09 117 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 DAZAP2Q15038 168 aaPredicted RBP11.62□□□□□ -0.55
CCDC13-201ENST00000310232 HIKESHIQ53FT3 197 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 RAET1LQ5VY80 246 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 SLC23A3Q6PIS1 610 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 LGI3Q8N145 548 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 TMEM252Q8N6L7 170 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 GALNT14Q96FL9 552 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 RASL10BQ96S79 203 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 CRIM1Q9NZV1 1036 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 WSB1Q9Y6I7 421 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 ADAMTS20P59510 1910 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 CEP192Q8TEP8 1941 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 C3orf85A0A1B0GTC6 90 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 ZNF587BE7ETH6 402 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 DUX1O43812 170 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 SCAF4O95104 1147 aaKnown RBP11.62□□□□□ -0.55
CCDC13-201ENST00000310232 TRGC1P0CF51 173 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 GNRHRP30968 328 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 NKX2-1P43699 371 aaPredicted RBP11.62□□□□□ -0.55
CCDC13-201ENST00000310232 OR2T2Q6IF00 324 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 TBC1D26Q86UD7 250 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 PLXDC1Q8IUK5 500 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 OR14L1PQ8NHC6 308 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 PP6455Q8WZ26 134 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 PIGCQ92535 297 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 SNX22Q96L94 193 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 FSCN3Q9NQT6 498 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 GNG13Q9P2W3 67 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 R4GN57 208 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 AHCTF1Q8WYP5 2266 aa11.62□□□□□ -0.55
CCDC13-201ENST00000310232 IFNL4K9M1U5 179 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 TNFSF11O14788 317 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 CD55P08174 381 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 SCTP09683 121 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 RAB11AP62491 216 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 TMEM267Q0VDI3 215 aaPredicted RBP11.61□□□□□ -0.55
CCDC13-201ENST00000310232 ZNF818PQ6ZRF7 136 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 UBALD1Q8TB05 177 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 BORCS8Q96FH0 119 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 RSG1Q9BU20 258 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 UBE2J1Q9Y385 318 aaPredicted RBP11.61□□□□□ -0.55
CCDC13-201ENST00000310232 USF3Q68DE3 2245 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 DHHO43323 396 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 PPYP01298 95 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 PGA5P0DJD9 388 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 FUT3P21217 361 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 HERV-K104P61576 105 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 RPL23AP62750 156 aaKnown RBP11.61□□□□□ -0.55
CCDC13-201ENST00000310232 GPR157Q5UAW9 335 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 WDR25Q64LD2 544 aaPredicted RBP11.61□□□□□ -0.55
CCDC13-201ENST00000310232 ULBP2Q9BZM5 246 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 TREM2Q9NZC2 230 aa11.61□□□□□ -0.55
CCDC13-201ENST00000310232 FOXD3Q9UJU5 478 aaPredicted RBP11.61□□□□□ -0.55
CCDC13-201ENST00000310232 STRAPQ9Y3F4 350 aaKnown RBP11.61□□□□□ -0.55
CCDC13-201ENST00000310232 NPIPA2E9PIF3 369 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 NPIPA3F8WFD2 350 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 HMGB3O15347 200 aaKnown RBP11.6□□□□□ -0.55
CCDC13-201ENST00000310232 PIAS2O75928 621 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 CCL2P13500 99 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 ZNF133P52736 654 aaPredicted RBP11.6□□□□□ -0.55
CCDC13-201ENST00000310232 SUCLG1P53597 346 aaKnown RBP11.6□□□□□ -0.55
CCDC13-201ENST00000310232 IL13RA2Q14627 380 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 SHBQ15464 509 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 LCN15Q6UWW0 184 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 GAPTQ8N292 157 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 COMMD1Q8N668 190 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 NECAP1Q8NC96 275 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 ZNF665Q9H7R5 613 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 MTCH2Q9Y6C9 303 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 KIAA1549Q9HCM3 1950 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 A0A0U1RQV5 110 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 MPPED1O15442 326 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 CHST1O43916 411 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 NDUFB7P17568 137 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 HNRNPKP61978 463 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC13-201ENST00000310232 ZNF92Q03936 586 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 C9orf135Q5VTT2 229 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 ZNF695Q8IW36 515 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 HIST3H2BBQ8N257 126 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 CRLF2Q9HC73 371 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 PRR14LQ5THK1 2151 aa11.6□□□□□ -0.55
CCDC13-201ENST00000310232 TRAV39A0A0B4J263 110 aa11.59□□□□□ -0.55
CCDC13-201ENST00000310232 WRBO00258 174 aa11.59□□□□□ -0.55
CCDC13-201ENST00000310232 CCL3P10147 92 aa11.59□□□□□ -0.55
CCDC13-201ENST00000310232 CD27P26842 260 aa11.59□□□□□ -0.55
CCDC13-201ENST00000310232 RBP2P50120 134 aa11.59□□□□□ -0.55
CCDC13-201ENST00000310232 SUMO3P55854 103 aaPredicted RBP11.59□□□□□ -0.55
CCDC13-201ENST00000310232 RPS18P62269 152 aaKnown RBP11.59□□□□□ -0.55
CCDC13-201ENST00000310232 LSM6P62312 80 aaKnown RBP11.59□□□□□ -0.55
CCDC13-201ENST00000310232 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms