RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 Q6P435 159 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 CD200R1LQ6Q8B3 271 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 Q8NFD4 153 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR4S1Q8NGB4 309 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 NEK7Q8TDX7 302 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ZNF418Q8TF45 676 aaPredicted RBP9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 LHX4Q969G2 390 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SUCNR1Q9BXA5 334 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SIRPDQ9H106 197 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PPIL3Q9H2H8 161 aaKnown RBP9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 BANF2Q9H503 90 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 METTL8Q9H825 291 aaKnown RBP9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SIRT7Q9NRC8 400 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ING3Q9NXR8 418 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 IGHV3OR16-10A0A075B7F0 116 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TRGV10A0A0A0MS01 117 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TRAV1-2A0A0B4J238 106 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 A0A0G2JK05 382 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 LOC100506127A0A0U1RQW1 187 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 H3BUI4 141 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SLC17A2O00624 439 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 GEMIN2O14893 280 aaKnown RBP9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 BPNT1O95861 308 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MPIG6BO95866 241 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FSHBP01225 129 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 IGHV4-38-2P0DP08 117 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 CD36P16671 472 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 RAB3BP20337 219 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ERP29P30040 261 aaKnown RBP9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 KCNJ3P48549 501 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 P2RX3P56373 397 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 BPIFB3P59826 476 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ERVFRD-1P60508 538 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ZNF273Q14593 569 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 RAB11BQ15907 218 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 KRBOX4Q5JUW0 171 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 C1orf100Q5SVJ3 147 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 RBMS3Q6XE24 437 aaKnown RBP9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TPRX1Q8N7U7 411 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM46BQ96A09 425 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ZNF714Q96N38 554 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TBX15Q96SF7 602 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TMEM59Q9BXS4 323 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SELENOIQ9C0D9 397 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SPACA1Q9HBV2 294 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TXNL4BQ9NX01 149 aaKnown RBP9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 LINC00312Q9Y6C7 94 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 V9GY05 133 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 C2CD3Q4AC94 2353 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 NAV3Q8IVL0 2385 aa9.05□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A10PA6NDY2 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A18PA6NE21 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A16PA6NEW6 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A20PA6NIJ5 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A8PA6NJQ4 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A7PA6NKC0 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A22PA8MWA6 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A12PA8MX19 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A5PA8MXJ8 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A23PA8MXZ1 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SLC22A1O15245 554 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TCF21O43680 179 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A15PP0C7V4 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A13PP0C7W8 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A14PP0C7W9 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FAM90A24PP0C7X0 464 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ARSBP15848 533 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 CCL3L1P16619 93 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FGF9P31371 208 aaPredicted RBP9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 AESQ08117 197 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 RBM39Q14498 530 aaKnown RBP9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TAF9Q16594 264 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 KLF17Q5JT82 389 aaPredicted RBP9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TMEM200BQ69YZ2 307 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 C1orf122Q6ZSJ8 110 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 LYPD6Q86Y78 171 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SUMF2Q8NBJ7 301 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 KCNG3Q8TAE7 436 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 C22orf15Q8WYQ4 148 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 KCTD7Q96MP8 289 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 JMJD8Q96S16 334 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SLC6A7Q99884 636 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 CHCHD6Q9BRQ6 235 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 DPCDQ9BVM2 203 aaPredicted RBP9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 BARHL1Q9BZE3 327 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR51E2Q9H255 320 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 GAL3ST2Q9H3Q3 398 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 IFT22Q9H7X7 185 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR6C3Q9NZP0 311 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 STEAP1Q9UHE8 339 aa9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 UBE2J1Q9Y385 318 aaPredicted RBP9.04□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MTORP42345 2549 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TRAV24A0A0B4J272 114 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 IGHV1-69DA0A0B4J2H0 117 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 CENPVL3A0A0U1RRI6 287 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ODAMA1E959 279 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MCRIP1C9JLW8 97 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 IGHV1-69P01742 117 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 RBP4P02753 201 aa9.03□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ZNF728P0DKX0 622 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms