RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CACNA1EQ15878 2313 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 TMEM14DPA8MWL7 114 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 DNASE2O00115 360 aaPredicted RBP11.63□□□□□ -0.55
DDX54-201ENST00000306014 SPINT2O43291 252 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 TGOLN2O43493 480 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 CCL3P10147 92 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 RPS2P15880 293 aaKnown RBP11.63□□□□□ -0.55
DDX54-201ENST00000306014 COX5AP20674 150 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 ATP6V0CP27449 155 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 HLA-DRB3P79483 266 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 OR8G1Q15617 311 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 OR8U8P0C7N1 319 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 SNCAP37840 140 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 UBE2G2P60604 165 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 ENDOGQ14249 297 aaKnown RBP11.63□□□□□ -0.55
DDX54-201ENST00000306014 C6orf15Q6UXA7 325 aaPredicted RBP11.63□□□□□ -0.55
DDX54-201ENST00000306014 ZNF66Q6ZN08 573 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 ZNF574Q6ZN55 896 aaPredicted RBP11.63□□□□□ -0.55
DDX54-201ENST00000306014 ZNF501Q96CX3 271 aaPredicted RBP11.63□□□□□ -0.55
DDX54-201ENST00000306014 GVINP1Q7Z2Y8 2422 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 VSTM5A8MXK1 200 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 H3BQ15 152 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 TERTO14746 1132 aaKnown RBP11.62□□□□□ -0.55
DDX54-201ENST00000306014 DEDDO75618 318 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 PGA4P0DJD7 388 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 FAM3AP98173 230 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 FSCN3Q9NQT6 498 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 CCL28Q9NRJ3 127 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 TCF20Q9UGU0 1960 aaKnown RBP11.62□□□□□ -0.55
DDX54-201ENST00000306014 VDAC1P21796 283 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 RAC3P60763 192 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 DLK1P80370 383 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 MPV17LQ2QL34 196 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 ZNF468Q5VIY5 522 aaPredicted RBP11.62□□□□□ -0.55
DDX54-201ENST00000306014 DHRS11Q6UWP2 260 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 RAB40CQ96S21 281 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 TIMP4Q99727 224 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 SOX7Q9BT81 388 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 UTRNP46939 3433 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 CACNA1DQ01668 2161 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 MAP1LC3B2A6NCE7 125 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 KLRC4-KLRK1H3BQV0 150 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 GAPDHP04406 335 aaKnown RBP11.62□□□□□ -0.55
DDX54-201ENST00000306014 DTYMKP23919 212 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 C1orf210Q8IVY1 113 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 ADAMTS17Q8TE56 1095 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 BTF3L4Q96K17 158 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 MAP1LC3BQ9GZQ8 125 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 SLC7A10Q9NS82 523 aa11.62□□□□□ -0.55
DDX54-201ENST00000306014 CNOT1A5YKK6 2376 aaKnown RBP11.61□□□□□ -0.55
DDX54-201ENST00000306014 MBPP02686 304 aaPredicted RBP11.61□□□□□ -0.55
DDX54-201ENST00000306014 PLPPR2Q96GM1 343 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 MYOZ1Q9NP98 299 aaPredicted RBP11.61□□□□□ -0.55
DDX54-201ENST00000306014 OCIAD1Q9NX40 245 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 CEP250Q9BV73 2442 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 RIF1Q5UIP0 2472 aaKnown RBP11.61□□□□□ -0.55
DDX54-201ENST00000306014 A0A1B0GTQ1 180 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 FCGR3AP08637 254 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 FGF7P21781 194 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 FHITP49789 147 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 GNG3P63215 75 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 ARRDC1-AS1Q9H2J1 176 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 GPR27Q9NS67 375 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 YIF1AO95070 293 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 CA6P23280 308 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 ZXDAP98168 799 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 RUNX1Q01196 453 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 PLAC9Q5JTB6 97 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 WDR74Q6RFH5 385 aaPredicted RBP11.61□□□□□ -0.55
DDX54-201ENST00000306014 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.61□□□□□ -0.55
DDX54-201ENST00000306014 C10orf35Q96D05 121 aa11.61□□□□□ -0.55
DDX54-201ENST00000306014 DHRS7CA6NNS2 312 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 PINX1Q96BK5 328 aaKnown RBP11.6□□□□□ -0.55
DDX54-201ENST00000306014 RTN4RQ9BZR6 473 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 ZNF320A2RRD8 509 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 CDS2O95674 445 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 LTBRP36941 435 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 FAM58AQ8N1B3 248 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 TMEM18Q96B42 140 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 TMEM68Q96MH6 324 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 IER2Q9BTL4 223 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 TGIF1Q15583 401 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 RSPO4Q2I0M5 234 aaPredicted RBP11.6□□□□□ -0.55
DDX54-201ENST00000306014 EIF4E3Q8N5X7 224 aaKnown RBP11.6□□□□□ -0.55
DDX54-201ENST00000306014 SPTBN2O15020 2390 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 LY86O95711 162 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 IL2RAP01589 272 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 IL24Q13007 206 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 SLC25A47Q6Q0C1 308 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 SLC25A22Q9H936 323 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 RAB9BQ9NP90 201 aa11.6□□□□□ -0.55
DDX54-201ENST00000306014 MBP02144 154 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 CEACAM6P40199 344 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 MZT1Q08AG7 82 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 SLC38A11Q08AI6 406 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 CXorf67Q86X51 503 aaPredicted RBP11.59□□□□□ -0.55
DDX54-201ENST00000306014 TRAV39A0A0B4J263 110 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 A0A0U1RQV5 110 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 SEC14L6B5MCN3 397 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 SOX15O60248 233 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms