RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PHF3Q92576 2039 aaKnown RBP11.4□□□□□ -0.58
TRIM35-201ENST00000305364 NOTCH4Q99466 2003 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 A0A1W2PQD3 144 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 M0R143 59 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 PDGFBP01127 241 aaPredicted RBP11.4□□□□□ -0.58
TRIM35-201ENST00000305364 PSMB3P49720 205 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 HBG1P69891 147 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 HBG2P69892 147 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 FNDC7Q5VTL7 733 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 LHFPL1Q86WI0 220 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 ZNF524Q96C55 264 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 SCARF2Q96GP6 870 aaPredicted RBP11.4□□□□□ -0.58
TRIM35-201ENST00000305364 GPHA2Q96T91 129 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 HS3ST3A1Q9Y663 406 aa11.4□□□□□ -0.58
TRIM35-201ENST00000305364 NBASA2RRP1 2371 aa11.4□□□□□ -0.59
TRIM35-201ENST00000305364 TP53I11O14683 189 aa11.4□□□□□ -0.59
TRIM35-201ENST00000305364 HOXC4P09017 264 aaPredicted RBP11.4□□□□□ -0.59
TRIM35-201ENST00000305364 FOXO1Q12778 655 aa11.4□□□□□ -0.59
TRIM35-201ENST00000305364 CXorf66Q5JRM2 361 aaPredicted RBP11.4□□□□□ -0.59
TRIM35-201ENST00000305364 OSR2Q8N2R0 312 aa11.4□□□□□ -0.59
TRIM35-201ENST00000305364 OIT3Q8WWZ8 545 aa11.4□□□□□ -0.59
TRIM35-201ENST00000305364 DDA1Q9BW61 102 aa11.4□□□□□ -0.59
TRIM35-201ENST00000305364 OR51I2Q9H344 312 aa11.4□□□□□ -0.59
TRIM35-201ENST00000305364 ZNF665Q9H7R5 613 aa11.4□□□□□ -0.59
TRIM35-201ENST00000305364 IL17BQ9UHF5 180 aa11.4□□□□□ -0.59
TRIM35-201ENST00000305364 TCN2P20062 427 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 GALR1P47211 349 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 SPCS3P61009 180 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 QRFPP83859 136 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 TMEM187Q14656 261 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 LBHQ53QV2 105 aaPredicted RBP11.39□□□□□ -0.59
TRIM35-201ENST00000305364 SPANXN5Q5MJ07 72 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 OR4F5Q8NH21 305 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 ZNF721Q8TF20 911 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 OR4F4Q96R69 305 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 MPPED1O15442 326 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 IGLV3-21P80748 117 aaPredicted RBP11.39□□□□□ -0.59
TRIM35-201ENST00000305364 LPAL2Q16609 132 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 RSPO4Q2I0M5 234 aaPredicted RBP11.39□□□□□ -0.59
TRIM35-201ENST00000305364 NOL4LQ96MY1 436 aaPredicted RBP11.39□□□□□ -0.59
TRIM35-201ENST00000305364 SAMD10Q9BYL1 202 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 IGHV3-15A0A0B4J1V0 119 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 LIPT2A6NK58 231 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 TRAPPC6AO75865 159 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 SNRPCP09234 159 aaKnown RBP11.39□□□□□ -0.59
TRIM35-201ENST00000305364 KIR2DL1P43626 348 aaPredicted RBP11.39□□□□□ -0.59
TRIM35-201ENST00000305364 HGFACQ04756 655 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 SHBQ15464 509 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 CDCP2Q5VXM1 449 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 KIAA0895LQ68EN5 471 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 OXGR1Q96P68 337 aa11.39□□□□□ -0.59
TRIM35-201ENST00000305364 A6NCN8 305 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 NRASP01111 189 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 METTL15P1P0C7V9 234 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 RPS2P15880 293 aaKnown RBP11.38□□□□□ -0.59
TRIM35-201ENST00000305364 FUT3P21217 361 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 FUT9Q9Y231 359 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 HS3ST3B1Q9Y662 390 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 CYB5R3P00387 301 aaPredicted RBP11.38□□□□□ -0.59
TRIM35-201ENST00000305364 CST2P09228 141 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 TMEM241Q24JQ0 296 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 ADIPOR1Q96A54 375 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 TICRRQ7Z2Z1 1910 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 SPTY2D1-AS1A0A0U1RR47 76 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 TSPAN2O60636 221 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 CDS2O95674 445 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 SPEM2Q0P670 501 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 PIGYQ3MUY2 71 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 TBC1D26Q86UD7 250 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 BOD1Q96IK1 185 aa11.38□□□□□ -0.59
TRIM35-201ENST00000305364 K7N7A8 449 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 PITX3O75364 302 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 PPYP01298 95 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 PGA3P0DJD8 388 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 TDHQ8IZJ6 230 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 FGF21Q9NSA1 209 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 CBLN4Q9NTU7 201 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 NUP210Q8TEM1 1887 aaPredicted RBP11.37□□□□□ -0.59
TRIM35-201ENST00000305364 MAP1LC3B2A6NCE7 125 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 G3V3Y1 287 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 CLDN1O95832 211 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 BSXQ3C1V8 233 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 LYSMD4Q5XG99 296 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 SLC25A26Q70HW3 274 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 ZNF100Q8IYN0 542 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 OR1P1Q8NH06 330 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 CYYR1Q96J86 154 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 WFIKKN1Q96NZ8 548 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 MAP1LC3BQ9GZQ8 125 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 PLA2G2EQ9NZK7 142 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 ZNF319Q9P2F9 582 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 FBLN5Q9UBX5 448 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 V9GYS6 101 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 SPTAN1Q13813 2472 aaKnown RBP11.37□□□□□ -0.59
TRIM35-201ENST00000305364 IGSF23A1L1A6 192 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 PPIHO43447 177 aaKnown RBP11.37□□□□□ -0.59
TRIM35-201ENST00000305364 PLGLB1Q02325 96 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 SDSLQ96GA7 329 aa11.37□□□□□ -0.59
TRIM35-201ENST00000305364 MRGPRX4Q96LA9 322 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms