RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 PTGFRP43088 359 aa13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 ARSJQ5FYB0 599 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 TMEM219Q86XT9 240 aa13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 ABHD12Q8N2K0 398 aa13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 OR4D6Q8NGJ1 314 aa13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 OR5D18Q8NGL1 313 aa13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 OR4P4Q8NGL7 312 aa13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 TSEN15Q8WW01 171 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 RDH12Q96NR8 316 aa13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 SPACA5Q96QH8 159 aa13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 OR6C3Q9NZP0 311 aa13.41□□□□□ -0.26
TRAPPC1-201ENST00000303731 ZNF729A6NN14 1252 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 LEUTXA8MZ59 168 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 DEGS1O15121 323 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 CALCBP10092 127 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 ZP1P60852 638 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 AESQ08117 197 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 CCDC58Q4VC31 144 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 KRBOX4Q5JUW0 171 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 LPCAT4Q643R3 524 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 ELP2Q6IA86 826 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 NDUFA11Q86Y39 141 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 C11orf44Q8N8P7 122 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 PXT1Q8NFP0 134 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 CAPSLQ8WWF8 208 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 JAM3Q9BX67 310 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 WNT10AQ9GZT5 417 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 NCOR1P1Q9H4R4 102 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 ISG20L2Q9H9L3 353 aaKnown RBP13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 LIN7BQ9HAP6 207 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 S100A14Q9HCY8 104 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 PLXNB1O43157 2135 aa13.4□□□□□ -0.26
TRAPPC1-201ENST00000303731 A0A087X0M5 115 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 A0A1B0GX30 115 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 OOSP1A8MZH6 123 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 SLC33A1O00400 549 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 XPNPEP2O43895 674 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 IGLV1-47P01700 117 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 CD2P06729 351 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 RAB3AP20336 220 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 VDAC2P45880 294 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 GLIPR1P48060 266 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 PRRX1P54821 245 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 SCN1BQ07699 218 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 PRAMEF5Q5TYX0 476 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 ZNF691Q5VV52 312 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 CCDC144NLQ6NUI1 221 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 Q6P435 159 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 PQLC1Q8N2U9 271 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 ZNF565Q8N9K5 539 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 ZNF555Q8NEP9 628 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 OR4F17Q8NGA8 305 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 OR52I1Q8NGK6 324 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 OR4F4Q96R69 305 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 ZNF649Q9BS31 505 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 AMBNQ9NP70 447 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 FAM118AQ9NWS6 357 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 AASSQ9UDR5 926 aa13.39□□□□□ -0.27
TRAPPC1-201ENST00000303731 IRGMA1A4Y4 181 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 TOR1AO14656 332 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 MMP23AO75900 390 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 KCNJ3P48549 501 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 HABP2Q14520 560 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 IL13RA2Q14627 380 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 WIPF2Q8TF74 440 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 STMN2Q93045 179 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 COQ2Q96H96 371 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 GPER1Q99527 375 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 SLC29A1Q99808 456 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 PDCD1LG2Q9BQ51 273 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 FGF20Q9NP95 211 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 PCDHB16Q9NRJ7 776 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 NOTCH3Q9UM47 2321 aa13.38□□□□□ -0.27
TRAPPC1-201ENST00000303731 H0YJX3 145 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 EBAG9O00559 213 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 DCKP27707 260 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 MNDAP41218 407 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 PAX5Q02548 391 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 ATXN7L3Q14CW9 347 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 CDK5R1Q15078 307 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 HLA-DRB5Q30154 266 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 KPRPQ5T749 579 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 ZNF529Q6P280 563 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 RPL22L1Q6P5R6 122 aaKnown RBP13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 TMPRSS11AQ6ZMR5 421 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 OR51T1Q8NGJ9 327 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 GPR148Q8TDV2 347 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 BARHL1Q9BZE3 327 aa13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 SMPD3Q9NY59 655 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 AMMECR1Q9Y4X0 333 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC1-201ENST00000303731 KBTBD11-OT1A0A1B0GTJ5 212 aa13.36□□□□□ -0.27
TRAPPC1-201ENST00000303731 E9PI62 339 aa13.36□□□□□ -0.27
TRAPPC1-201ENST00000303731 BUB1B-PAK6H3BSN5 160 aa13.36□□□□□ -0.27
TRAPPC1-201ENST00000303731 M0QZK8 103 aa13.36□□□□□ -0.27
TRAPPC1-201ENST00000303731 LIMS3P0CW19 117 aa13.36□□□□□ -0.27
TRAPPC1-201ENST00000303731 LIMS4P0CW20 117 aa13.36□□□□□ -0.27
TRAPPC1-201ENST00000303731 CD28P10747 220 aa13.36□□□□□ -0.27
TRAPPC1-201ENST00000303731 C21orf33P30042 268 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC1-201ENST00000303731 BLCAPP62952 87 aa13.36□□□□□ -0.27
TRAPPC1-201ENST00000303731 RSU1Q15404 277 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms