RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 LALBAP00709 142 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 EPXP11678 715 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 ROM1Q03395 351 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 SLC38A11Q08AI6 406 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 DEFB121Q5J5C9 76 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 C17orf47Q8NEP4 570 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 TLNRD1Q9H1K6 362 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 METTL1Q9UBP6 276 aaKnown RBP6.83□□□□□ -1.32
SCN9A-201ENST00000303354 TMEFF2Q9UIK5 374 aaPredicted RBP6.83□□□□□ -1.32
SCN9A-201ENST00000303354 CSF2RBP32927 897 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 PRNTQ86SH4 94 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 SVBPQ8N300 66 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 OR4P4Q8NGL7 312 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 TERB2Q8NHR7 220 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 ZPLD1Q8TCW7 415 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 DIRC2Q96SL1 478 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 KCNIP2Q9NS61 270 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 IGHA1P01876 353 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 IGHA2P01877 340 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 KCNMB1Q16558 191 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 RRN3P1Q2M238 152 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 NCR3LG1Q68D85 454 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 LYG2Q86SG7 212 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 C5orf17Q8NAS9 161 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 WFDC12Q8WWY7 111 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 HEXA-AS1Q9H8Q6 139 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 NTN4Q9HB63 628 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 TMEM200CA6NKL6 621 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 CHRNA7P36544 502 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 ASB5Q8WWX0 329 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 RNASEK-C17orf49H0YIS7 233 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 UCNP55089 124 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 OR6C3Q9NZP0 311 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 E5RGE8 158 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 MT-ND4LP03901 98 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 BVESQ8NE79 360 aa6.83□□□□□ -1.32
SCN9A-201ENST00000303354 A0A1W2PQM1 296 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 FGF2P09038 288 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 UCP2P55851 309 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 RPL31P62899 125 aaKnown RBP6.82□□□□□ -1.32
SCN9A-201ENST00000303354 NHLRC1Q6VVB1 395 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 C16orf82Q7Z2V1 217 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 RIMKLAQ8IXN7 391 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 SAP25Q8TEE9 199 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 MED30Q96HR3 178 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 FAM210AQ96ND0 272 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 H7BYZ3 331 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 LINC01387J3KSC0 135 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 ZNF154Q13106 437 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 PEAR1Q5VY43 1037 aaPredicted RBP6.82□□□□□ -1.32
SCN9A-201ENST00000303354 WDR88Q6ZMY6 472 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 SLC25A21Q9BQT8 299 aaPredicted RBP6.82□□□□□ -1.32
SCN9A-201ENST00000303354 WSB1Q9Y6I7 421 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 PPP5D1E7EU14 171 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 ADAP1O75689 374 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 HIST1H1DP16402 221 aaKnown RBP6.82□□□□□ -1.32
SCN9A-201ENST00000303354 PRDX2P32119 198 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 DDOSTP39656 456 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 IGFBP7Q16270 282 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 FBXW9Q5XUX1 488 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 GDF15Q99988 308 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 SLC25A19Q9HC21 320 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 ATP6V1G2-DDX39BF2Z307 99 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 CMPK2Q5EBM0 449 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 OR4X1Q8NH49 305 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 SGK494Q96LW2 274 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 AP5S1Q9NUS5 200 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 RAF1P04049 648 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 ACP1P24666 158 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 PSG5Q15238 335 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 GAPTQ8N292 157 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 ZCCHC24Q8N2G6 241 aaKnown RBP6.82□□□□□ -1.32
SCN9A-201ENST00000303354 LMX1BO60663 402 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 CD276Q5ZPR3 534 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 TRAT1Q6PIZ9 186 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 C10orf111Q8N326 155 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 OR5C1Q8NGR4 320 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 SLC7A10Q9NS82 523 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 LYNX1G3V0Z9 82 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 LYNX1P0DP58 116 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 OR8I2Q8N0Y5 310 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 OOEPA6NGQ2 149 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 ACSM4P0C7M7 580 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 NUBP1P53384 320 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 RAB32Q13637 225 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 VWA1Q6PCB0 445 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 COMMD1Q8N668 190 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 OR8G5Q8NG78 346 aa6.82□□□□□ -1.32
SCN9A-201ENST00000303354 GMPPAQ96IJ6 420 aaPredicted RBP6.82□□□□□ -1.32
SCN9A-201ENST00000303354 A0A1W2PN81 502 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 TMEM129A0AVI4 362 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 ZFPL1O95159 310 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 TFF1P04155 84 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 OR5AL1P0C617 328 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 PSG2P11465 335 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 C1orf53Q5VUE5 145 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 UNQ5815/PRO19632Q6UWF5 114 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 STXBP6Q8NFX7 210 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 OR8D4Q8NGM9 314 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms