RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 HILPDAQ9Y5L2 63 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 B4DEV8 164 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 FCGR2BP31994 310 aaPredicted RBP12.67□□□□□ -0.38
HIPK3-201ENST00000303296 JOSD1Q15040 202 aaPredicted RBP12.67□□□□□ -0.38
HIPK3-201ENST00000303296 KRTCAP3Q53RY4 240 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 FAM27D1Q5T7N8 215 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 ST8SIA1Q92185 356 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 EID2BQ96D98 161 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 TRAV21A0A0B4J279 112 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 FFAR1O14842 300 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 CYS1Q717R9 158 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 MAFAQ8NHW3 353 aaPredicted RBP12.67□□□□□ -0.38
HIPK3-201ENST00000303296 DAPP1Q9UN19 280 aa12.67□□□□□ -0.38
HIPK3-201ENST00000303296 GCAP28676 217 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 ZNF252P-AS1Q0IIN9 211 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 AQP6Q13520 282 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 GPR35Q9HC97 309 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 CCL27Q9Y4X3 112 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 NPPBP16860 134 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 OTX1P32242 354 aaPredicted RBP12.66□□□□□ -0.38
HIPK3-201ENST00000303296 CTU2Q2VPK5 515 aaKnown RBP12.66□□□□□ -0.38
HIPK3-201ENST00000303296 GGTA1PQ4G0N0 100 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 DUX5Q96PT3 197 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 RAB40CQ96S21 281 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 TMEM38AQ9H6F2 299 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 CMC2Q9NRP2 79 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 SETD1AO15047 1707 aaKnown RBP12.66□□□□□ -0.38
HIPK3-201ENST00000303296 PAGE4O60829 102 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 ALX3O95076 343 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 GFERP55789 205 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 OR4S2Q8NH73 311 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 WNT5BQ9H1J7 359 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 GHITMQ9H3K2 345 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 HDGFL3Q9Y3E1 203 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 A0A1B0GU03 582 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 NUBP1P53384 320 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 METRNLQ641Q3 311 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 EMCNQ9ULC0 261 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 ZDHHC8Q9ULC8 765 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 ZNF680Q8NEM1 530 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 MMP25Q9NPA2 562 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 LDLRAD4O15165 306 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 DHHO43323 396 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 CDK2AP2O75956 126 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 CDS2O95674 445 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 PGA3P0DJD8 388 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 SLC25A35Q3KQZ1 300 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 FAM219AQ8IW50 185 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 TMEM229BQ8NBD8 167 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 ISOC2Q96AB3 205 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 MS4A6EQ96DS6 147 aa12.66□□□□□ -0.38
HIPK3-201ENST00000303296 NPFFO15130 113 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 TGFAP01135 160 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 KISS1Q15726 138 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 CMPK2Q5EBM0 449 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 CXXC4Q9H2H0 198 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 MANBALQ9NQG1 85 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 CKS2P33552 79 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 ZNF774Q6NX45 483 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
HIPK3-201ENST00000303296 NTNG2Q96CW9 530 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 R3HDM4Q96D70 268 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 TEX37Q96LM6 180 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 HDHD3Q9BSH5 251 aaPredicted RBP12.65□□□□□ -0.38
HIPK3-201ENST00000303296 TRAV17A0A0B4J275 112 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 LINC00303Q3SY05 128 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 LBHQ53QV2 105 aaPredicted RBP12.65□□□□□ -0.38
HIPK3-201ENST00000303296 CHRNA10Q9GZZ6 450 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 METTL12A8MUP2 240 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 SNRPGP15A8MWD9 76 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 SCMH1Q96GD3 660 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 PRR13Q9NZ81 148 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 C7orf71A4D174 169 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 SMAD7O15105 426 aaKnown RBP12.65□□□□□ -0.38
HIPK3-201ENST00000303296 DUSP8Q13202 625 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 RNPS1Q15287 305 aaKnown RBP12.65□□□□□ -0.38
HIPK3-201ENST00000303296 ZNF56Q15929 161 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 PNLIPRP3Q17RR3 467 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 CADM3Q8N126 398 aa12.65□□□□□ -0.38
HIPK3-201ENST00000303296 FCGR3AP08637 254 aa12.65□□□□□ -0.39
HIPK3-201ENST00000303296 MRPS11P82912 194 aaKnown RBP12.65□□□□□ -0.39
HIPK3-201ENST00000303296 C3AR1Q16581 482 aa12.65□□□□□ -0.39
HIPK3-201ENST00000303296 SAXO2Q658L1 398 aa12.65□□□□□ -0.39
HIPK3-201ENST00000303296 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.39
HIPK3-201ENST00000303296 MRM1Q6IN84 353 aaKnown RBP12.64□□□□□ -0.39
HIPK3-201ENST00000303296 RND1Q92730 232 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 CYB5R1Q9UHQ9 305 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 SEC16AO15027 2179 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 KHDC3LQ587J8 217 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 NSUN5P2Q63ZY6 315 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 ABLIM2Q6H8Q1 611 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 COPS9Q8WXC6 57 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 Q9N2K0 584 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 ADAMTS5Q9UNA0 930 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 TMEM78Q5T7P6 136 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 C4orf45Q96LM5 186 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 NEU1Q99519 415 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 FGF22Q9HCT0 170 aa12.64□□□□□ -0.39
HIPK3-201ENST00000303296 TOMM7Q9P0U1 55 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms