RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SHEQ5VZ18 495 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 PEG10Q86TG7 708 aaKnown RBP7.87□□□□□ -1.15
RFX3-201ENST00000302303 LINC00596Q86U02 117 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 GAPTQ8N292 157 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 BPIFB2Q8N4F0 458 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 ZNF561Q8N587 486 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 OR4M1Q8NGD0 313 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 OR6Q1Q8NGQ2 317 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 OR10R2Q8NGX6 335 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 RAB40AQ8WXH6 277 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 ST8SIA4Q92187 359 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 AP3S1Q92572 193 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 DYRK2Q92630 601 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 TIMD4Q96H15 378 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 COQ2Q96H96 371 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 C1orf159Q96HA4 380 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 ARHGAP5-AS1Q96IT6 56 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 Q96MF0 132 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 WDFY2Q96P53 400 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 PIMREGQ9BSJ6 248 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 FAAP24Q9BTP7 215 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 PECRQ9BY49 303 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 ATG5Q9H1Y0 275 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 ZNF665Q9H7R5 613 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.87□□□□□ -1.15
RFX3-201ENST00000302303 HSF4Q9ULV5 492 aa7.87□□□□□ -1.15
RFX3-201ENST00000302303 FAM157AC9JC47 383 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 XRCC3O43542 346 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 PDCD6O75340 191 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 CLPXO76031 633 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 CSN2P05814 226 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 MELTFP08582 738 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 ZNF44P15621 663 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 SLC25A16P16260 332 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 PITPNBP48739 271 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 IL13RA1P78552 427 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 PAX5Q02548 391 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 WDR25Q64LD2 544 aaPredicted RBP7.86□□□□□ -1.15
RFX3-201ENST00000302303 RAB12Q6IQ22 244 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 MZT2AQ6P582 158 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 TCF23Q7RTU1 214 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 CCDC190Q86UF4 302 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 IZUMO1Q8IYV9 350 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 MUC20Q8N307 709 aaPredicted RBP7.86□□□□□ -1.15
RFX3-201ENST00000302303 CHST4Q8NCG5 386 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 SNX22Q96L94 193 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 ABHD1Q96SE0 405 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 NUDT16L1Q9BRJ7 211 aaKnown RBP7.86□□□□□ -1.15
RFX3-201ENST00000302303 URM1Q9BTM9 101 aaKnown RBP7.86□□□□□ -1.15
RFX3-201ENST00000302303 DPCDQ9BVM2 203 aaPredicted RBP7.86□□□□□ -1.15
RFX3-201ENST00000302303 REG4Q9BYZ8 158 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 CHST6Q9GZX3 395 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 ZMAT3Q9HA38 289 aaKnown RBP7.86□□□□□ -1.15
RFX3-201ENST00000302303 PTTG2Q9NZH5 202 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 MIOXQ9UGB7 285 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 PEX16Q9Y5Y5 336 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 YLPM1P49750 1951 aaKnown RBP7.86□□□□□ -1.15
RFX3-201ENST00000302303 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 TEX15Q9BXT5 2789 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 ABCA2Q9BZC7 2435 aa7.86□□□□□ -1.15
RFX3-201ENST00000302303 MALRD1Q5VYJ5 2156 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 A0A0A6YYH2 397 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 ISPDA4D126 451 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 A6NJ64 397 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 HSPB6O14558 160 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 SSX5O60225 188 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 GLAP06280 429 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 CGB3P0DN86 165 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 CGB7P0DN87 165 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 HIST1H1DP16402 221 aaKnown RBP7.85□□□□□ -1.15
RFX3-201ENST00000302303 GNB3P16520 340 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 MNDAP41218 407 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 RANBP1P43487 201 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 LOXL1Q08397 574 aaPredicted RBP7.85□□□□□ -1.15
RFX3-201ENST00000302303 KCNJ8Q15842 424 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 ATAD3CQ5T2N8 411 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 RSBN1Q5VWQ0 802 aaPredicted RBP7.85□□□□□ -1.15
RFX3-201ENST00000302303 CNIH2Q6PI25 160 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 Q6ZTK2 550 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 C5orf24Q7Z6I8 188 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 OR8H2Q8N162 312 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 MAPK1IP1LQ8NDC0 245 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 OR56B1Q8NGI3 324 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 NEIL1Q96FI4 390 aaPredicted RBP7.85□□□□□ -1.15
RFX3-201ENST00000302303 MED30Q96HR3 178 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 HDHD3Q9BSH5 251 aaPredicted RBP7.85□□□□□ -1.15
RFX3-201ENST00000302303 C6orf62Q9GZU0 229 aaPredicted RBP7.85□□□□□ -1.15
RFX3-201ENST00000302303 FAM234AQ9H0X4 552 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 PPA2Q9H2U2 334 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 V9GYH0 126 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 ITPR3Q14573 2671 aa7.85□□□□□ -1.15
RFX3-201ENST00000302303 ARHGAP32A7KAX9 2087 aa7.84□□□□□ -1.15
RFX3-201ENST00000302303 CR1P17927 2039 aa7.84□□□□□ -1.15
RFX3-201ENST00000302303 TRAV18A0A075B6X5 111 aa7.84□□□□□ -1.15
RFX3-201ENST00000302303 UBE2QL1A1L167 161 aa7.84□□□□□ -1.15
RFX3-201ENST00000302303 METTL21EPA6NDL7 271 aa7.84□□□□□ -1.15
RFX3-201ENST00000302303 A8MXK9 166 aa7.84□□□□□ -1.15
RFX3-201ENST00000302303 C22orf46C9J442 243 aa7.84□□□□□ -1.15
RFX3-201ENST00000302303 RGS5O15539 181 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms