RNA–Protein interactions for RNA: ENST00000300213.8

CCNDBP1-201, Transcript of cyclin D1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNDBP1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-201ENST00000300213 IL13RA2Q14627 380 aa12.85□□□□□ -0.35
CCNDBP1-201ENST00000300213 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCNDBP1-201ENST00000300213 LYPD6BQ8NI32 183 aa12.85□□□□□ -0.35
CCNDBP1-201ENST00000300213 SEMA5BQ9P283 1151 aa12.85□□□□□ -0.35
CCNDBP1-201ENST00000300213 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 OR5R1Q8NH85 324 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 TP53RKQ96S44 253 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 DUSP15Q9H1R2 295 aaPredicted RBP12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 LIME1Q9H400 295 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 PLEK2Q9NYT0 353 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 KLHL13Q9P2N7 655 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 TUBD1Q9UJT1 453 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 ZNF320A2RRD8 509 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 SERPINE3A8MV23 424 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 FOXS1O43638 330 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 OPN1MWP04001 364 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 OPN1MW2P0DN77 364 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 OPN1MW3P0DN78 364 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 UCP3P55916 312 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 CARD18P57730 90 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 PMP22Q01453 160 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 ZNF92Q03936 586 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 TRA2AQ13595 282 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 TMEM187Q14656 261 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 OR8G2PQ6IF36 304 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 GRINAQ7Z429 371 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 SLC35E3Q7Z769 313 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 LHX4Q969G2 390 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 BOD1Q96IK1 185 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 ZNF845Q96IR2 970 aaPredicted RBP12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 IGKV1-9A0A0C4DH69 117 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 DDAH2O95865 285 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 CYB5R3P00387 301 aaPredicted RBP12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 METTL15P1P0C7V9 234 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 CEACAM1P13688 526 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 S100A7P31151 101 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 NUBP1P53384 320 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 OR4F5Q8NH21 305 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 ZNF296Q8WUU4 475 aaPredicted RBP12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 RLN3Q8WXF3 142 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 OR4F4Q96R69 305 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 RPP25Q9BUL9 199 aaKnown RBP12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 ZNF286AQ9HBT8 521 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 SLC39A9Q9NUM3 307 aa12.84□□□□□ -0.35
CCNDBP1-201ENST00000300213 VSTM2BA6NLU5 285 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 PDGFBP01127 241 aaPredicted RBP12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 HSPB1P04792 205 aaKnown RBP12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 PIGYQ3MUY2 71 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 CCDC71LQ8N9Z2 235 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 CLDND2Q8NHS1 167 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 FLVCR1-AS1Q8TAF5 88 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 GNPNAT1Q96EK6 184 aaPredicted RBP12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 POU2F2P09086 479 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 RELQ04864 619 aaPredicted RBP12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 DLX2Q07687 328 aaPredicted RBP12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 OR10S1Q8NGN2 331 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 PRSS50Q9UI38 385 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 LOC102724200A0A096LPH7 203 aaPredicted RBP12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 GRIFINA4D1Z8 144 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 BCAT2O15382 392 aaPredicted RBP12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 RBMXL2O75526 392 aaKnown RBP12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 ZNF43P17038 809 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 AADACP22760 399 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 TMEM234Q8WY98 164 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 SAMD10Q9BYL1 202 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 VSIRQ9H7M9 311 aa12.83□□□□□ -0.36
CCNDBP1-201ENST00000300213 MS4A18H0YCH9 400 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 DLEU1O43261 78 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 DXOO77932 396 aaKnown RBP12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 EGR1P18146 543 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 CD81P60033 236 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 GNB2P62879 340 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 FUT7Q11130 342 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 MS4A18Q3C1V0 323 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 UBALD1Q8TB05 177 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 VN1R17PQ8TDU5 208 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 PTPMT1Q8WUK0 201 aaPredicted RBP12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 ASB10Q8WXI3 467 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 GLRX2Q9NS18 164 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 RPRMQ9NS64 109 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 CHD9Q3L8U1 2897 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 TNFSF14O43557 240 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 IRF2P14316 349 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 SUCLG1P53597 346 aaKnown RBP12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 BSXQ3C1V8 233 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 DOK3Q7L591 496 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 IL1F10Q8WWZ1 152 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 SGCZQ96LD1 299 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 SPTBN2O15020 2390 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 A0A087WWC5 75 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 FAM78BQ5VT40 261 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 DPPA3Q6W0C5 159 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 ZNF100Q8IYN0 542 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 C11orf42Q8N5U0 333 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 SLC46A1Q96NT5 459 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 DIRC2Q96SL1 478 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 V9GYS6 101 aa12.82□□□□□ -0.36
CCNDBP1-201ENST00000300213 TNFP01375 233 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms