RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 HSD17B11Q8NBQ5 300 aa11.72□□□□□ -0.53
CDH8-201ENST00000299345 SPACA1Q9HBV2 294 aa11.72□□□□□ -0.53
CDH8-201ENST00000299345 ARGFXA6NJG6 315 aa11.72□□□□□ -0.53
CDH8-201ENST00000299345 TOR1AO14656 332 aa11.72□□□□□ -0.53
CDH8-201ENST00000299345 MPPED1O15442 326 aa11.72□□□□□ -0.53
CDH8-201ENST00000299345 FGF12P61328 243 aa11.72□□□□□ -0.53
CDH8-201ENST00000299345 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.72□□□□□ -0.53
CDH8-201ENST00000299345 PUSL1Q8N0Z8 303 aaKnown RBP11.72□□□□□ -0.53
CDH8-201ENST00000299345 CLRN3Q8NCR9 226 aa11.72□□□□□ -0.53
CDH8-201ENST00000299345 WNT2BQ93097 391 aa11.72□□□□□ -0.53
CDH8-201ENST00000299345 SHANK1Q9Y566 2161 aa11.72□□□□□ -0.53
CDH8-201ENST00000299345 DOCK7Q96N67 2140 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 VPS13AQ96RL7 3174 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 GLAP06280 429 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 F2RL1P55085 397 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 KRTAP27-1Q3LI81 207 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 HES3Q5TGS1 186 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 FAM185AQ8N0U4 392 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 GLYATL2Q8WU03 294 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 DECR2Q9NUI1 292 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 HSD17B6O14756 317 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 GPR137BO60478 399 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 GAPDHP04406 335 aaKnown RBP11.71□□□□□ -0.53
CDH8-201ENST00000299345 COX5BP10606 129 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 UCP3P55916 312 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 TSC22D1Q15714 1073 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 HIKESHIQ53FT3 197 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 SPATA46Q5T0L3 261 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 NUFIP2Q7Z417 695 aaKnown RBP11.71□□□□□ -0.53
CDH8-201ENST00000299345 OPA3Q9H6K4 179 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 LUZP4Q9P127 313 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 R4GN57 208 aa11.71□□□□□ -0.53
CDH8-201ENST00000299345 FREM1Q5H8C1 2179 aa11.71□□□□□ -0.54
CDH8-201ENST00000299345 ZNF724A8MTY0 619 aa11.71□□□□□ -0.54
CDH8-201ENST00000299345 TERTO14746 1132 aaKnown RBP11.71□□□□□ -0.54
CDH8-201ENST00000299345 FAM157CP0CG43 387 aa11.71□□□□□ -0.54
CDH8-201ENST00000299345 LPAR6P43657 344 aa11.71□□□□□ -0.54
CDH8-201ENST00000299345 NKX2-1P43699 371 aaPredicted RBP11.71□□□□□ -0.54
CDH8-201ENST00000299345 MRPL49Q13405 166 aaKnown RBP11.71□□□□□ -0.54
CDH8-201ENST00000299345 OR2T2Q6IF00 324 aa11.71□□□□□ -0.54
CDH8-201ENST00000299345 SLC35G3Q8N808 338 aa11.71□□□□□ -0.54
CDH8-201ENST00000299345 OR5A2Q8NGI9 324 aa11.71□□□□□ -0.54
CDH8-201ENST00000299345 IL1F10Q8WWZ1 152 aa11.71□□□□□ -0.54
CDH8-201ENST00000299345 ADAT1Q9BUB4 502 aaKnown RBP11.71□□□□□ -0.54
CDH8-201ENST00000299345 RCL1Q9Y2P8 373 aaKnown RBP11.71□□□□□ -0.54
CDH8-201ENST00000299345 PQLC2LA1A4F0 135 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A10PA6NDY2 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A18PA6NE21 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A16PA6NEW6 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A20PA6NIJ5 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A8PA6NJQ4 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A7PA6NKC0 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A22PA8MWA6 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A12PA8MX19 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A5PA8MXJ8 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A23PA8MXZ1 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 RNASEK-C17orf49H0YIS7 233 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 H7C1Q1 480 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 SLC33A1O00400 549 aaPredicted RBP11.7□□□□□ -0.54
CDH8-201ENST00000299345 HSPA12AO43301 675 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 CTXN2P0C2S0 81 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A15PP0C7V4 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A13PP0C7W8 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A14PP0C7W9 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 FAM90A24PP0C7X0 464 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 OMGP23515 440 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 SULT1A2P50226 295 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 UBE2NP61088 152 aaKnown RBP11.7□□□□□ -0.54
CDH8-201ENST00000299345 GNG3P63215 75 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 GPR157Q5UAW9 335 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 COLCA1Q6ZS62 124 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 DOCK10Q96BY6 2186 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 SLC22A20A6NK97 555 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 DNASE2O00115 360 aaPredicted RBP11.7□□□□□ -0.54
CDH8-201ENST00000299345 SCTP09683 121 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 CD59P13987 128 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
CDH8-201ENST00000299345 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 MPV17LQ2QL34 196 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 ERGIC1Q969X5 290 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 EIF5A2Q9GZV4 153 aaKnown RBP11.7□□□□□ -0.54
CDH8-201ENST00000299345 TLNRD1Q9H1K6 362 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 PLK3Q9H4B4 646 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 ZNF552Q9H707 407 aaPredicted RBP11.7□□□□□ -0.54
CDH8-201ENST00000299345 PRSS50Q9UI38 385 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 TRGV5A0A0B4J1U4 118 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 MSTNO14793 375 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 SYNGR1O43759 233 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 TBC1D26Q86UD7 250 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 OR52M1Q8NGK5 317 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 POM121Q96HA1 1249 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 ZNF488Q96MN9 340 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 CDH20Q9HBT6 801 aa11.7□□□□□ -0.54
CDH8-201ENST00000299345 A0A1B0GV50 99 aa11.69□□□□□ -0.54
CDH8-201ENST00000299345 CDK2AP1O14519 115 aa11.69□□□□□ -0.54
CDH8-201ENST00000299345 F12P00748 615 aaPredicted RBP11.69□□□□□ -0.54
CDH8-201ENST00000299345 OR8U9P0C7N5 309 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms