RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CHRFAM7AQ494W8 412 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 OR5AP2Q8NGF4 316 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 TRAF4Q9BUZ4 470 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-202ENST00000297979 ATMQ13315 3056 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 OR4E1P0C645 316 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 PMELP40967 661 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 MPV17LQ2QL34 196 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 BRICD5Q6PL45 260 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 PLK3Q9H4B4 646 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 SMLR1H3BR10 107 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 M0R1B8 84 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 FCGR3AP08637 254 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 PF4V1P10720 104 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 GZMKP49863 264 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 OR8G1Q15617 311 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF718Q3SXZ3 478 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 WDR86Q86TI4 376 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 TMEM17Q86X19 198 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 LIX1LQ8IVB5 337 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 MUC20Q8N307 709 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-202ENST00000297979 SPICQ8N5J4 248 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 OR8G5Q8NG78 346 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 TERB2Q8NHR7 220 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 NANPQ8TBE9 248 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF431Q8TF32 576 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-202ENST00000297979 DYRK2Q92630 601 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF442Q9H7R0 627 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 GSN-AS1Q9NRJ2 163 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 EHFQ9NZC4 300 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 MGAT4CQ9UBM8 478 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 NPTNQ9Y639 398 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 BSNQ9UPA5 3926 aa12.15□□□□□ -0.46
C9orf3-202ENST00000297979 FABP7O15540 132 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 KITLGP21583 273 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 ERP29P30040 261 aaKnown RBP12.15□□□□□ -0.47
C9orf3-202ENST00000297979 GCH1P30793 250 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 MEOX2P50222 304 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 FAM27E3Q08E93 113 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 IGFBP7Q16270 282 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 MBNL2Q5VZF2 373 aaKnown RBP12.15□□□□□ -0.47
C9orf3-202ENST00000297979 LINC00596Q86U02 117 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 ZNF436Q9C0F3 470 aaPredicted RBP12.15□□□□□ -0.47
C9orf3-202ENST00000297979 PPA2Q9H2U2 334 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 UFSP2Q9NUQ7 469 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 TMEM100Q9NV29 134 aa12.15□□□□□ -0.47
C9orf3-202ENST00000297979 IGKV1D-8A0A087WSZ0 117 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 TIMM8AO60220 97 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-202ENST00000297979 SSX2Q16385 188 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 C17orf107Q6ZR85 190 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 MARVELD3Q96A59 401 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 ZNF488Q96MN9 340 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 RHOFQ9HBH0 211 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 CHMP1AQ9HD42 196 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-202ENST00000297979 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 IL36RNQ9UBH0 155 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 POLDIP2Q9Y2S7 368 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 ESPL1Q14674 2120 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 ZGRF1Q86YA3 2104 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 TMEM210A6NLX4 147 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 C1QTNF9BB2RNN3 333 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 GPR37O15354 613 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 RHBDL1O75783 438 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 MBP02144 154 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 C1QTNF9P0C862 333 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 FABP6P51161 128 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 CDK10Q15131 360 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 OVCH2Q7RTZ1 564 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 SCCPDHQ8NBX0 429 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 RCC2Q9P258 522 aaKnown RBP12.14□□□□□ -0.47
C9orf3-202ENST00000297979 ANXA10Q9UJ72 324 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 FZR1Q9UM11 496 aa12.14□□□□□ -0.47
C9orf3-202ENST00000297979 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-202ENST00000297979 SDCBPO00560 298 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-202ENST00000297979 ID4P47928 161 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 IKZF1Q13422 519 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 TOR2AQ5JU69 321 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 SLC25A42Q86VD7 318 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 FAM58AQ8N1B3 248 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 OR13G1Q8NGZ3 307 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 MARCH1Q8TCQ1 289 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 FN3KRPQ9HA64 309 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 ELOVL5Q9NYP7 299 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 H0YL77 283 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 CRYAAP02489 173 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 KLRB1Q12918 225 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 ZNF154Q13106 437 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 IL13RA2Q14627 380 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 RGS7BPQ6MZT1 257 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-202ENST00000297979 LHFPL1Q86WI0 220 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 DLL4Q9NR61 685 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 CA10Q9NS85 328 aa12.13□□□□□ -0.47
C9orf3-202ENST00000297979 CEACAM18A8MTB9 384 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 MLNRO43193 412 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 SNRNP70P08621 437 aaKnown RBP12.12□□□□□ -0.47
C9orf3-202ENST00000297979 PTAFRP25105 342 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 CCKARP32238 428 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 NUP62P37198 522 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-202ENST00000297979 DHRS2Q13268 280 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 GRK1Q15835 563 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms