RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 MYOZ3Q8TDC0 251 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 RARRES2Q99969 163 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 FER1L4A9Z1Z3 1794 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 C5orf49A4QMS7 147 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 P2RY1P47900 373 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 ADPRHP54922 357 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 PABPC1L2AQ5JQF8 200 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 BCORP1Q8N888 145 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 ALX4Q9H161 411 aaPredicted RBP10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 PTRH2Q9Y3E5 179 aaKnown RBP10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 FUT3P21217 361 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF345Q14585 488 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM189-UBE2V1I3L0A0 370 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 OPRK1P41145 380 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 MGAT2Q10469 447 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 PARS2Q7L3T8 475 aaKnown RBP10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 GPR62Q9BZJ7 368 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 TRAV8-7A0A075B6U6 113 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 ZFPL1O95159 310 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 OSR2Q8N2R0 312 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 OR4F17Q8NGA8 305 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 MRPL18Q9H0U6 180 aaKnown RBP10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 CNOT1A5YKK6 2376 aaKnown RBP10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 H0YL77 283 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 ZFAND5O76080 213 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 TGFAP01135 160 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM95Q3KNT9 176 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 COX19Q49B96 90 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 LYZP61626 148 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 GCSAMLQ5JQS6 135 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 LILRA3Q8N6C8 439 aaPredicted RBP10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 PDXPQ96GD0 296 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 HSD17B10Q99714 261 aaKnown RBP10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 SUOXP51687 545 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 CNTD2Q9H8S5 307 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 ICAM2P13598 275 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 FNDC7Q5VTL7 733 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF660Q6AZW8 331 aaPredicted RBP10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 VASH2Q86V25 355 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 GLRX2Q9NS18 164 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 BOKQ9UMX3 212 aaPredicted RBP10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 ARFGEF1Q9Y6D6 1849 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 MRGPRGQ86SM5 289 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF683Q8IZ20 524 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 PRSS38A1L453 326 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 LRRC30A6NM36 301 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 MYOGP15173 224 aa10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 INSM2Q96T92 566 aaPredicted RBP10.48□□□□□ -0.73
SHROOM3-201ENST00000296043 FREM1Q5H8C1 2179 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 FGF18O76093 207 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 HERPUD1Q15011 391 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 KHDC1LQ5JSQ8 128 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 AMMECR1LQ6DCA0 310 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 SLC35E3Q7Z769 313 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 RPS4Y1P22090 263 aaKnown RBP10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 RPEQ96AT9 228 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 SIGMAR1Q99720 223 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 ORM1P02763 201 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 OR8I2Q8N0Y5 310 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 GALNSP34059 522 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 METAP1P53582 386 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 TMSB15BA0A087X1C1 80 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 NKX2-6A6NCS4 301 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 SSR4P51571 173 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 SPCS1Q9Y6A9 102 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 COL6A6A6NMZ7 2263 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 FAM157CP0CG43 387 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 FOLR2P14207 255 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 BTF3P20290 206 aaKnown RBP10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 WDR38Q5JTN6 314 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 MGPP08493 103 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 PMCHL1Q16048 86 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 CDX2Q99626 313 aaPredicted RBP10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 C1QL1O75973 258 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 LGALS4P56470 323 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 OR52N5Q8NH56 324 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 FOXC2Q99958 501 aa10.47□□□□□ -0.73
SHROOM3-201ENST00000296043 B4GALT1P15291 398 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 ELOVL5Q9NYP7 299 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM202A6NGA9 273 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 IQCF3P0C7M6 154 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 MRPL30Q8TCC3 161 aaKnown RBP10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 GALMQ96C23 342 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 KTI12Q96EK9 354 aaPredicted RBP10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 HILPDAQ9Y5L2 63 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 A0A1B0GTL3 188 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 ASPDHA6ND91 283 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF729A6NN14 1252 aaPredicted RBP10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 FCGR3BO75015 233 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM215Q68D42 235 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 MUCL1Q96DR8 90 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 LCORQ96JN0 433 aaPredicted RBP10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 SLC25A42Q86VD7 318 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 LINC01553A4QN01 128 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 OR2T8A6NH00 312 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 HEPACAM2A8MVW5 462 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 H3BMH7 237 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 SNAI2O43623 268 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 CHST1O43916 411 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms