RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 NARFLQ9H6Q4 476 aa12.68□□□□□ -0.38
CCDC140-201ENST00000295226 WIPI2Q9Y4P8 454 aa12.68□□□□□ -0.38
CCDC140-201ENST00000295226 PPIAL4AQ9Y536 164 aa12.68□□□□□ -0.38
CCDC140-201ENST00000295226 NPTNQ9Y639 398 aa12.68□□□□□ -0.38
CCDC140-201ENST00000295226 A0A1B0GW55 424 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 OOEPA6NGQ2 149 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 ZNF780AO75290 641 aaPredicted RBP12.67□□□□□ -0.38
CCDC140-201ENST00000295226 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 PSG2P11465 335 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 AMY2BP19961 511 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 GABRR1P24046 479 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 CDK2P24941 298 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 FAUP35544 74 aaKnown RBP12.67□□□□□ -0.38
CCDC140-201ENST00000295226 GABRA2P47869 451 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 TAS2R20P59543 309 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 BRICD5Q6PL45 260 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 DUX4L9Q6RFH8 374 aaPredicted RBP12.67□□□□□ -0.38
CCDC140-201ENST00000295226 Q8IYB0 196 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 Q8NFD4 153 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 OR51T1Q8NGJ9 327 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 LPAR5Q9H1C0 372 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 TMEM165Q9HC07 324 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 BEX4Q9NWD9 120 aaPredicted RBP12.67□□□□□ -0.38
CCDC140-201ENST00000295226 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 METRNQ9UJH8 293 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 RAB22AQ9UL26 194 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 EDARQ9UNE0 448 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 IGKV1D-17A0A075B6S4 117 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 OR2AT4A6NND4 320 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 IFNL4K9M1U5 179 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 LGALS8O00214 317 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 PRAF2O60831 178 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 RBM11P57052 281 aaKnown RBP12.67□□□□□ -0.38
CCDC140-201ENST00000295226 RPS27AP62979 156 aaKnown RBP12.67□□□□□ -0.38
CCDC140-201ENST00000295226 MICBQ29980 383 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 SMIM21Q3B7S5 101 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 MOGAT2Q3SYC2 334 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 OLFML2AQ68BL7 652 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 LYPD2Q6UXB3 125 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 OR2W3Q7Z3T1 314 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 CD177Q8N6Q3 437 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 Q96M66 194 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 CCL13Q99616 98 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 ATG5Q9H1Y0 275 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 RASL12Q9NYN1 266 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 NOTCH2Q04721 2471 aa12.67□□□□□ -0.38
CCDC140-201ENST00000295226 PRRC2AP48634 2157 aaKnown RBP12.66□□□□□ -0.38
CCDC140-201ENST00000295226 CCDC168Q8NDH2 2452 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 FAM172BPA6NC97 362 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 SOCS1O15524 211 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 IGHV2-70P01814 119 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 SELLP14151 372 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 ERP29P30040 261 aaKnown RBP12.66□□□□□ -0.38
CCDC140-201ENST00000295226 GPR6P46095 362 aaPredicted RBP12.66□□□□□ -0.38
CCDC140-201ENST00000295226 VEGFCP49767 419 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 PDLIM4P50479 330 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 TMEM33P57088 247 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 MRPS15P82914 257 aaKnown RBP12.66□□□□□ -0.38
CCDC140-201ENST00000295226 IKZF1Q13422 519 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 TEX36Q5VZQ5 186 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 PEG10Q86TG7 708 aaKnown RBP12.66□□□□□ -0.38
CCDC140-201ENST00000295226 NOXA1Q86UR1 476 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 GLCCI1Q86VQ1 547 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 IZUMO1Q8IYV9 350 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 OR52I2Q8NH67 350 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 TMEM246Q9BRR3 403 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 BPESC1Q9GZL8 116 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 BARX1Q9HBU1 254 aaPredicted RBP12.66□□□□□ -0.38
CCDC140-201ENST00000295226 PCDHB16Q9NRJ7 776 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 NUDT15Q9NV35 164 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 FBLN5Q9UBX5 448 aa12.66□□□□□ -0.38
CCDC140-201ENST00000295226 IGHV4-30-2A0A087WSY4 118 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 ANKRD20A5PA0PJZ0 165 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 SIRPB1O00241 398 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 SULT1C2O00338 296 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 HSPB6O14558 160 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 OR7C1O76099 320 aaPredicted RBP12.65□□□□□ -0.38
CCDC140-201ENST00000295226 HAND1O96004 215 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 KNG1P01042 644 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 H2AFB2P0C5Z0 115 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 GIFP27352 417 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 PRDX2P32119 198 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 CD276Q5ZPR3 534 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 STUMQ69YW2 141 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 SIGIRRQ6IA17 410 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 Q6P435 159 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 ANGPTL6Q8NI99 470 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 FAM168AQ92567 244 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 RAB1CQ92928 201 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 MBD6Q96DN6 1003 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 MED28Q9H204 178 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 AUNIPQ9H7T9 357 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 RANGRFQ9HD47 186 aaPredicted RBP12.65□□□□□ -0.38
CCDC140-201ENST00000295226 MED13LQ71F56 2210 aa12.65□□□□□ -0.38
CCDC140-201ENST00000295226 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms