RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 RBM24Q9BX46 236 aaKnown RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 MRPL13Q9BYD1 178 aaKnown RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 PLEK2Q9NYT0 353 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF814B7Z6K7 855 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 CYB5R3P00387 301 aaPredicted RBP8.91□□□□□ -0.98
LMX1A-201ENST00000294816 IFNA5P01569 189 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 CD55P08174 381 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 PNLIPP16233 465 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF25P17030 456 aaPredicted RBP8.91□□□□□ -0.98
LMX1A-201ENST00000294816 TMEM267Q0VDI3 215 aaPredicted RBP8.91□□□□□ -0.98
LMX1A-201ENST00000294816 PMS2P11Q13670 270 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 TMEM92Q6UXU6 159 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 UCK1Q9HA47 277 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 PNRC2Q9NPJ4 139 aaKnown RBP8.91□□□□□ -0.98
LMX1A-201ENST00000294816 CPAMD8Q8IZJ3 1885 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 TMEM131Q92545 1883 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 LOC102723971A0A1B0GUV8 181 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 CHST1O43916 411 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 EFNA2O43921 213 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 LBX1P52954 281 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 P2RY6Q15077 328 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 LBHQ53QV2 105 aaPredicted RBP8.91□□□□□ -0.98
LMX1A-201ENST00000294816 CRIP3Q6Q6R5 217 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 HIST1H2AAQ96QV6 131 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 NEU1Q99519 415 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 SPIN2AQ99865 258 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 SPIN2BQ9BPZ2 258 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 RSG1Q9BU20 258 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 LRRC61Q9BV99 259 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 CRISPLD2Q9H0B8 497 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 DCAF16Q9NXF7 216 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 ASXL3Q9C0F0 2248 aa8.91□□□□□ -0.98
LMX1A-201ENST00000294816 TRDCB7Z8K6 153 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 H3BMH7 237 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 DVL1O14640 695 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 MPPED1O15442 326 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 SCGB1D1O95968 90 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 RAB4BP61018 213 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 RNF4P78317 190 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 BADQ92934 168 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 NOL4LQ96MY1 436 aaPredicted RBP8.9□□□□□ -0.98
LMX1A-201ENST00000294816 SPEGQ15772 3267 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 NCOA6Q14686 2063 aaPredicted RBP8.9□□□□□ -0.98
LMX1A-201ENST00000294816 RALGAPA1Q6GYQ0 2036 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 IGKV3D-11A0A0A0MRZ8 115 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 SPTY2D1-AS1A0A0U1RR47 76 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 A0A1W2PPQ1 181 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 B4DEV8 164 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 MKRN2OSH3BPM6 223 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 TLX3O43711 291 aaPredicted RBP8.9□□□□□ -0.98
LMX1A-201ENST00000294816 OR7C1O76099 320 aaPredicted RBP8.9□□□□□ -0.98
LMX1A-201ENST00000294816 CCL1P22362 96 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 ELLP55199 621 aaPredicted RBP8.9□□□□□ -0.98
LMX1A-201ENST00000294816 FAM90A2PQ658T7 463 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 SLC25A47Q6Q0C1 308 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 TBC1D26Q86UD7 250 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF100Q8IYN0 542 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 SCGB1C1Q8TD33 95 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 PP6455Q8WZ26 134 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 RPUSD4Q96CM3 377 aaKnown RBP8.9□□□□□ -0.98
LMX1A-201ENST00000294816 BORCS8Q96FH0 119 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 METTL7AQ9H8H3 244 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 LYRM2Q9NU23 88 aaPredicted RBP8.9□□□□□ -0.98
LMX1A-201ENST00000294816 LTBP2Q14767 1821 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 UNC13CQ8NB66 2214 aa8.9□□□□□ -0.98
LMX1A-201ENST00000294816 A0A1B0GU03 582 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 IFNL4K9M1U5 179 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 M0R135 149 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 HMGB3O15347 200 aaKnown RBP8.9□□□□□ -0.99
LMX1A-201ENST00000294816 TRAF3IP2O43734 574 aaPredicted RBP8.9□□□□□ -0.99
LMX1A-201ENST00000294816 OPN1MWP04001 364 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 OPN1MW2P0DN77 364 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 OPN1MW3P0DN78 364 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 COX5BP10606 129 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 TNFRSF9Q07011 255 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 FAM69BQ5VUD6 431 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 SSC4DQ8WTU2 575 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 FAM131CQ96AQ9 280 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 ZNF799Q96GE5 643 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 SMIM7Q9BQ49 75 aa8.9□□□□□ -0.99
LMX1A-201ENST00000294816 HSPB6O14558 160 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 TMEM50AO95807 157 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 PPYP01298 95 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 MBP02144 154 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 OR4A8P0C604 315 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 COL13A1Q5TAT6 717 aaPredicted RBP8.89□□□□□ -0.99
LMX1A-201ENST00000294816 C16orf82Q7Z2V1 217 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 FAM185AQ8N0U4 392 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 NEK7Q8TDX7 302 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 RAB24Q969Q5 203 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 MOB3AQ96BX8 217 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 KLHDC7BQ96G42 594 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 OR5B12Q96R08 314 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 C8orf33Q9H7E9 229 aaPredicted RBP8.89□□□□□ -0.99
LMX1A-201ENST00000294816 ST3GAL6Q9Y274 331 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 IGHV3-15A0A0B4J1V0 119 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 PPP5D1E7EU14 171 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 TGOLN2O43493 480 aa8.89□□□□□ -0.99
LMX1A-201ENST00000294816 CDS2O95674 445 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms