RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 PRRT4C9JH25 899 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 RER1O15258 196 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 FMODQ06828 376 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 MRPL58Q14197 206 aaKnown RBP11.03□□□□□ -0.64
SLX4-201ENST00000294008 FAHD1Q6P587 224 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 WFDC5Q8TCV5 224 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 MED30Q96HR3 178 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 HIST1H4GQ99525 98 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 HS3ST2Q9Y278 367 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 CHST1O43916 411 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 DUSP8Q13202 625 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 NRN1LQ496H8 165 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 FAM209BQ5JX69 171 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 LDLRAD3Q86YD5 345 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 DND1Q8IYX4 353 aaKnown RBP11.03□□□□□ -0.64
SLX4-201ENST00000294008 SPICQ8N5J4 248 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 KLHDC9Q8NEP7 349 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 LRRC61Q9BV99 259 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 SLC25A10Q9UBX3 287 aaPredicted RBP11.03□□□□□ -0.64
SLX4-201ENST00000294008 MTCH2Q9Y6C9 303 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 PPLO60437 1756 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 IGHV3-66A0A0C4DH42 116 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 HYAL3O43820 417 aaPredicted RBP11.03□□□□□ -0.64
SLX4-201ENST00000294008 NSUN5P1Q3KNT7 163 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 SLC25A53Q5H9E4 307 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 SLC25A40Q8TBP6 338 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 FGF14Q92915 247 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 TOLLIPQ9H0E2 274 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 ZNF665Q9H7R5 613 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 ISG20L2Q9H9L3 353 aaKnown RBP11.03□□□□□ -0.64
SLX4-201ENST00000294008 TMEM38BQ9NVV0 291 aa11.03□□□□□ -0.64
SLX4-201ENST00000294008 KIDINS220Q9ULH0 1771 aa11.02□□□□□ -0.64
SLX4-201ENST00000294008 SNRPGP15A8MWD9 76 aa11.02□□□□□ -0.64
SLX4-201ENST00000294008 TGFAP01135 160 aa11.02□□□□□ -0.64
SLX4-201ENST00000294008 FAM106CPP0CH98 169 aa11.02□□□□□ -0.64
SLX4-201ENST00000294008 UNQ5815/PRO19632Q6UWF5 114 aa11.02□□□□□ -0.64
SLX4-201ENST00000294008 C10orf126Q8N4M7 172 aa11.02□□□□□ -0.64
SLX4-201ENST00000294008 ARHGAP5-AS1Q96IT6 56 aa11.02□□□□□ -0.64
SLX4-201ENST00000294008 C12orf57Q99622 126 aa11.02□□□□□ -0.64
SLX4-201ENST00000294008 HIGD1AQ9Y241 93 aa11.02□□□□□ -0.64
SLX4-201ENST00000294008 GAGE10A6NGK3 116 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 RBFOX2O43251 390 aaKnown RBP eCLIP11.02□□□□□ -0.65
SLX4-201ENST00000294008 SAA1P0DJI8 122 aaPredicted RBP11.02□□□□□ -0.65
SLX4-201ENST00000294008 ALX4Q9H161 411 aaPredicted RBP11.02□□□□□ -0.65
SLX4-201ENST00000294008 LRP12Q9Y561 859 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 RIMBP3CA6NJZ7 1639 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 RIMBP3BA6NNM3 1639 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 RIMBP3Q9UFD9 1639 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 ADGRB2O60241 1585 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 METTL12A8MUP2 240 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 TMEM189-UBE2V1I3L0A0 370 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 M0R143 59 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 TAPBPO15533 448 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 SRSF10O75494 262 aaKnown RBP11.02□□□□□ -0.65
SLX4-201ENST00000294008 IL4P05112 153 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 AVPR2P30518 371 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 GZMKP49863 264 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 B4GALNT1Q00973 533 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 ZNF415Q09FC8 603 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 C2orf83Q53S99 150 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 TMEM240Q5SV17 173 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 APCSP02743 223 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 EPHA8P29322 1005 aaPredicted RBP11.02□□□□□ -0.65
SLX4-201ENST00000294008 DYNLT3P51808 116 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 ZNHIT1O43257 154 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 DCTDP32321 178 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 CCL8P80075 99 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 SH2D5Q6ZV89 423 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 PHLDA1Q8WV24 401 aaPredicted RBP11.02□□□□□ -0.65
SLX4-201ENST00000294008 RNF7Q9UBF6 113 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 TINAGQ9UJW2 476 aa11.02□□□□□ -0.65
SLX4-201ENST00000294008 hCG_38984A0A1B0GV85 526 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 TFAP2AP05549 437 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 VSTM2AQ8TAG5 236 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 ADAMTS17Q8TE56 1095 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 CST2P09228 141 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 HYAL1Q12794 435 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 COTL1Q14019 142 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 RNF165Q6ZSG1 346 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 PRRX2Q99811 253 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 C19orf53Q9UNZ5 99 aaPredicted RBP11.01□□□□□ -0.65
SLX4-201ENST00000294008 HAND1O96004 215 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 C9orf50Q5SZB4 431 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 SLC23A3Q6PIS1 610 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 LINC00470Q9BZP3 86 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 TRAV20A0A0B4J274 112 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 TRDV1A0A1B0GX56 115 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 HMGN4O00479 90 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 FAM26EQ8N5C1 309 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 C11orf44Q8N8P7 122 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 ARNTLO00327 626 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 HOXC11O43248 304 aaPredicted RBP11.01□□□□□ -0.65
SLX4-201ENST00000294008 IGHV3-23P01764 117 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 HIST1H1BP16401 226 aaKnown RBP11.01□□□□□ -0.65
SLX4-201ENST00000294008 OR4A5Q8NH83 315 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 EID2BQ96D98 161 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 TOX2Q96NM4 488 aa11.01□□□□□ -0.65
SLX4-201ENST00000294008 IGHV3-35A0A0C4DH35 117 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms