RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 EAF1Q96JC9 268 aaPredicted RBP14.29□□□□□ -0.12
SSRP1-202ENST00000293880 ECM29Q5VYK3 1845 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 TAF1P21675 1872 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 TRGV5A0A0B4J1U4 118 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 M0R3E3 92 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 IGLV3-25P01717 112 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 MELTFP08582 738 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 TP53I13Q8NBR0 393 aaPredicted RBP14.29□□□□□ -0.12
SSRP1-202ENST00000293880 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.29□□□□□ -0.12
SSRP1-202ENST00000293880 SLC45A2Q9UMX9 530 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 ANKRD20A5PA0PJZ0 165 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 PLPP2O43688 288 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 AREGP15514 252 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 LINC00299Q6ZSB3 139 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 D2HGDHQ8N465 521 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 INHBBP09529 407 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 WNT3P56703 355 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 SMAD4Q13485 552 aaKnown RBP14.29□□□□□ -0.12
SSRP1-202ENST00000293880 PRICKLE4Q2TBC4 344 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 OR2C3Q8N628 320 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 SLC26A10Q8NG04 563 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 PLA2G2FQ9BZM2 168 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 TMED3Q9Y3Q3 217 aa14.29□□□□□ -0.12
SSRP1-202ENST00000293880 TMSB15BA0A087X1C1 80 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 WNT5AP41221 380 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 ERVFRD-1P60508 538 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 PSG5Q15238 335 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 WFDC3Q8IUB2 231 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 C5orf17Q8NAS9 161 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 FIGNL2A6NMB9 653 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 IER3P46695 156 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 UBE2L3P68036 154 aaKnown RBP14.28□□□□□ -0.12
SSRP1-202ENST00000293880 NAT8Q9UHE5 227 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 TRBV5-4A0A0C4DH59 114 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 DIRC3C9JPN6 131 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 C11orf94C9JXX5 98 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 GNG3P63215 75 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 HLA-BQ31612 363 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 TMEM196Q5HYL7 178 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 OR2T10Q8NGZ9 312 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 TMEM208Q9BTX3 173 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 RAB33BQ9H082 229 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 A0A1W2PPC4 97 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 OR8B12Q8NGG6 310 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 SPAG8Q99932 426 aaPredicted RBP14.28□□□□□ -0.12
SSRP1-202ENST00000293880 SIRT7Q9NRC8 400 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 CT62P0C5K7 136 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 SLC6A1P30531 599 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 PDPNQ86YL7 162 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 ARRDC1Q8N5I2 433 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 NUP37Q8NFH4 326 aa14.28□□□□□ -0.12
SSRP1-202ENST00000293880 MYOZ1Q9NP98 299 aaPredicted RBP14.28□□□□□ -0.12
SSRP1-202ENST00000293880 SOCS1O15524 211 aa14.27□□□□□ -0.12
SSRP1-202ENST00000293880 THSD4Q6ZMP0 1018 aa14.27□□□□□ -0.12
SSRP1-202ENST00000293880 TM4SF19Q96DZ7 209 aa14.27□□□□□ -0.12
SSRP1-202ENST00000293880 MTFP1Q9UDX5 166 aa14.27□□□□□ -0.12
SSRP1-202ENST00000293880 SERGEFQ9UGK8 458 aa14.27□□□□□ -0.12
SSRP1-202ENST00000293880 ADIPOQQ15848 244 aa14.27□□□□□ -0.12
SSRP1-202ENST00000293880 ZNF738Q8NE65 137 aa14.27□□□□□ -0.12
SSRP1-202ENST00000293880 OCIAD1Q9NX40 245 aa14.27□□□□□ -0.12
SSRP1-202ENST00000293880 IGHV5-51A0A0C4DH38 117 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 PRSS54Q6PEW0 395 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 MOGAT1Q96PD6 335 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 SRSF10O75494 262 aaKnown RBP14.27□□□□□ -0.13
SSRP1-202ENST00000293880 TSPAN13O95857 204 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 MT-CO3P00414 261 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 IL36GQ9NZH8 169 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 DUXBA0A1W2PPF3 345 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 PRRX1P54821 245 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 TNFAIP6P98066 277 aaPredicted RBP14.27□□□□□ -0.13
SSRP1-202ENST00000293880 SPATA45Q537H7 98 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 CLEC18BQ6UXF7 455 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 C4orf45Q96LM5 186 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 ABHD1Q96SE0 405 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 SOSTQ9BQB4 213 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 Q9N2K0 584 aa14.27□□□□□ -0.13
SSRP1-202ENST00000293880 PLPP3O14495 311 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 CDC42EP2O14613 210 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 ST8SIA5O15466 376 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 SOD3P08294 240 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 SPINK14Q6IE38 97 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 MBD3L1Q8WWY6 194 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 RAB40CQ96S21 281 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 SEC11CQ9BY50 192 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 ORM1P02763 201 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 RCC1P18754 421 aaPredicted RBP14.26□□□□□ -0.13
SSRP1-202ENST00000293880 DLX1P56177 255 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 TMEM65Q6PI78 240 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 MSRB3Q8IXL7 192 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 PP6455Q8WZ26 134 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 V9GYH0 126 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 TRPM3Q9HCF6 1732 aaPredicted RBP14.26□□□□□ -0.13
SSRP1-202ENST00000293880 PNLIPP16233 465 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 BVESQ8NE79 360 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 SMOC1Q9H4F8 434 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 ITGB4P16144 1822 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 CHST1O43916 411 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 IGFBP7Q16270 282 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 SFTPA1Q8IWL2 248 aa14.26□□□□□ -0.13
SSRP1-202ENST00000293880 OR10D3Q8NH80 312 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms