RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ONECUT1Q9UBC0 465 aa22.12■■□□□ 1.13
SSU72-201ENST00000291386 SSR3Q9UNL2 185 aa22.12■■□□□ 1.13
SSU72-201ENST00000291386 TRAV24A0A0B4J272 114 aa22.11■■□□□ 1.13
SSU72-201ENST00000291386 SHISA3A0PJX4 238 aa22.11■■□□□ 1.13
SSU72-201ENST00000291386 SLC17A2O00624 439 aa22.11■■□□□ 1.13
SSU72-201ENST00000291386 MYL9P24844 172 aa22.11■■□□□ 1.13
SSU72-201ENST00000291386 RANBP1P43487 201 aa22.11■■□□□ 1.13
SSU72-201ENST00000291386 EDDM3BP56851 147 aa22.11■■□□□ 1.13
SSU72-201ENST00000291386 SLC25A28Q96A46 364 aa22.11■■□□□ 1.13
SSU72-201ENST00000291386 CST11Q9H112 138 aa22.11■■□□□ 1.13
SSU72-201ENST00000291386 V9GY05 133 aa22.11■■□□□ 1.13
SSU72-201ENST00000291386 FUOMA2VDF0 154 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A10PA6NDY2 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A18PA6NE21 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A16PA6NEW6 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A20PA6NIJ5 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A8PA6NJQ4 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A7PA6NKC0 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A22PA8MWA6 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A12PA8MX19 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A5PA8MXJ8 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A23PA8MXZ1 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 GEMIN2O14893 280 aaKnown RBP22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A15PP0C7V4 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A13PP0C7W8 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A14PP0C7W9 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 FAM90A24PP0C7X0 464 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 MGMTP16455 207 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 CD36P16671 472 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 CFPP27918 469 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 KCNJ3P48549 501 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 P2RX3P56373 397 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 BPIFB3P59826 476 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 PAX5Q02548 391 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 METAP1DQ6UB28 335 aaPredicted RBP22.1■■□□□ 1.13
SSU72-201ENST00000291386 VMO1Q7Z5L0 202 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 TMEM104Q8NE00 496 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 OR51E2Q9H255 320 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 PPA2Q9H2U2 334 aa22.1■■□□□ 1.13
SSU72-201ENST00000291386 TRAV40A0A0B4J280 105 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 BPNT1O95861 308 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 IFNA2P01563 188 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 IGHV4-38-2P0DP08 117 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 VSIG8P0DPA2 414 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 EPHA1P21709 976 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 BLMHQ13867 455 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 ZNF273Q14593 569 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 TUSC1Q2TAM9 212 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 C9orf139Q6ZV77 190 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 C11orf42Q8N5U0 333 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 Q96M66 194 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 NCOR1P1Q9H4R4 102 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 METTL8Q9H825 291 aaKnown RBP22.09■■□□□ 1.13
SSU72-201ENST00000291386 PLGRKTQ9HBL7 147 aa22.09■■□□□ 1.13
SSU72-201ENST00000291386 hADV38S2A0JD32 116 aa22.08■■□□□ 1.13
SSU72-201ENST00000291386 CRTAPO75718 401 aaPredicted RBP22.08■■□□□ 1.13
SSU72-201ENST00000291386 OR7C1O76099 320 aaPredicted RBP22.08■■□□□ 1.13
SSU72-201ENST00000291386 PRTN3P24158 256 aa22.08■■□□□ 1.13
SSU72-201ENST00000291386 DLX6P56179 175 aa22.08■■□□□ 1.13
SSU72-201ENST00000291386 QRFPP83859 136 aa22.08■■□□□ 1.13
SSU72-201ENST00000291386 EDDM3AQ14507 147 aa22.08■■□□□ 1.13
SSU72-201ENST00000291386 PAN3Q58A45 887 aaKnown RBP22.08■■□□□ 1.13
SSU72-201ENST00000291386 GDPGP1Q6ZNW5 385 aa22.08■■□□□ 1.13
SSU72-201ENST00000291386 PRIMA1Q86XR5 153 aa22.08■■□□□ 1.13
SSU72-201ENST00000291386 BANF2Q9H503 90 aa22.08■■□□□ 1.13
SSU72-201ENST00000291386 LINC00312Q9Y6C7 94 aa22.08■■□□□ 1.13
SSU72-201ENST00000291386 JMJD1CQ15652 2540 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 CENPVL3A0A0U1RRI6 287 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 C17orf98A8MV24 154 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 TMEM14DPA8MWL7 114 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 SMIM18P0DKX4 95 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 RAB3BP20337 219 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 GADD45AP24522 165 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 TAF9Q16594 264 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 GPR157Q5UAW9 335 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 TCF23Q7RTU1 214 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 SUMF2Q8NBJ7 301 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 KCNG3Q8TAE7 436 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 CORO2AQ92828 525 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 TNFRSF14Q92956 283 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 YIPF6Q96EC8 236 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 COQ2Q96H96 371 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 DPCDQ9BVM2 203 aaPredicted RBP22.07■■□□□ 1.12
SSU72-201ENST00000291386 SELENOIQ9C0D9 397 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 SPACA1Q9HBV2 294 aa22.07■■□□□ 1.12
SSU72-201ENST00000291386 RCC2Q9P258 522 aaKnown RBP22.07■■□□□ 1.12
SSU72-201ENST00000291386 H3BUI4 141 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 RBP4P02753 201 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 AESQ08117 197 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 RAB11BQ15907 218 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 OR2W3Q7Z3T1 314 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 TPRA1Q86W33 373 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 TPRX1Q8N7U7 411 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 CHCHD6Q9BRQ6 235 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 ZNF581Q9P0T4 197 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 ZNF69Q9UC07 566 aa22.06■■□□□ 1.12
SSU72-201ENST00000291386 UBE2J1Q9Y385 318 aaPredicted RBP22.06■■□□□ 1.12
SSU72-201ENST00000291386 hCG_1809904A0A1W2PP81 198 aa22.05■■□□□ 1.12
SSU72-201ENST00000291386 A0A1W2PPE2 198 aa22.05■■□□□ 1.12
SSU72-201ENST00000291386 A0A1W2PR64 198 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms