RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TMEM230Q96A57 120 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 SLC25A46Q96AG3 418 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 RPEQ96AT9 228 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 S1PR3Q99500 378 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 SPIN2AQ99865 258 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 SSX3Q99909 188 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 SPIN2BQ9BPZ2 258 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 NAA50Q9GZZ1 169 aaKnown RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 TAAR3PQ9P1P4 343 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 PPP1R3CQ9UQK1 317 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 MPC1Q9Y5U8 109 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 SETXQ7Z333 2677 aaKnown RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 AKR7A2O43488 359 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 SULT1B1O43704 296 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 LOXP28300 417 aaPredicted RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 TAGLNQ01995 201 aaKnown RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 MSMO1Q15800 293 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 KCNJ8Q15842 424 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 STUMQ69YW2 141 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 GSG1LQ6UXU4 331 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 LRRTM1Q86UE6 522 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 NAA40Q86UY6 237 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 DMRTC2Q8IXT2 367 aaPredicted RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 TMEM217Q8N7C4 229 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 SPSB1Q96BD6 273 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 PTTG2Q9NZH5 202 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 STARD10Q9Y365 291 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 IGLV3-9A0A075B6K5 115 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 ZNF705EA8MWA4 302 aaPredicted RBP7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 GOSR2O14653 212 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 SSX4O60224 188 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 IL13RA1P78552 427 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 BSPH1Q075Z2 132 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 CDSNQ15517 529 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 ZNF674Q2M3X9 581 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 AKR1C8PQ5T2L2 129 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 CST9LP1Q5W188 147 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 OR8G2PQ6IF36 304 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 GLIPR1L1Q6UWM5 242 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 SPAG16Q8N0X2 631 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 OR13C5Q8NGS8 318 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 OR2AE1Q8NHA4 323 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 SSC4DQ8WTU2 575 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 KCTD12Q96CX2 325 aaKnown RBP7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 NXF2Q9GZY0 626 aaKnown RBP7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 PPA2Q9H2U2 334 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 POFUT1Q9H488 388 aa7.21□□□□□ -1.25
PTPDC1-201ENST00000288976 DEFB108AA8MXU0 73 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 PIN1P1O15428 100 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 SNRPBP14678 240 aaKnown RBP7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 FAHP16930 419 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 ATF1P18846 271 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 CD34P28906 385 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 METAP1DQ6UB28 335 aaPredicted RBP7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 BTNL3Q6UXE8 466 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 IL34Q6ZMJ4 242 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 OR51A4Q8NGJ6 313 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 DYNC2LI1Q8TCX1 351 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 CMTM3Q96MX0 182 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 UQCC2Q9BRT2 126 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 COMMD5Q9GZQ3 224 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 RANBP3Q9H6Z4 567 aaPredicted RBP7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 SAP30LQ9HAJ7 183 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 NRASP01111 189 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 ANOS1P23352 680 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 CPT2P23786 658 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 OR3A4PP47883 348 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 SCGB2A2Q13296 93 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 SPCS2Q15005 226 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 LHFPL2Q6ZUX7 228 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 OR2AK2Q8NG84 335 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 OR1M1Q8NGA1 313 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 OR10AD1Q8NGE0 317 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 RPL3LQ92901 407 aaKnown RBP7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 SLAMF9Q96A28 289 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 MSL2Q9HCI7 577 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 CLEC5AQ9NY25 188 aa7.21□□□□□ -1.26
PTPDC1-201ENST00000288976 DPRXA6NFQ7 191 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 ZZEF1O43149 2961 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 SLC22A5O76082 557 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 OR5G3P0C626 314 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 PET100P0DJ07 73 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 SRP9P49458 86 aaKnown RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 KLF3P57682 345 aaPredicted RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 TNK1Q13470 666 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 HABP2Q14520 560 aaPredicted RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 EFNB3Q15768 340 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 FAM209AQ5JX71 171 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 OR10AC1Q8NH08 325 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 SLC25A40Q8TBP6 338 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 MRPS24Q96EL2 167 aaKnown RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 DIRC2Q96SL1 478 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 CHST6Q9GZX3 395 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 METTL17Q9H7H0 456 aaPredicted RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 RHOFQ9HBH0 211 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 IGHV3OR16-10A0A075B7F0 116 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 SHISA9B4DS77 424 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 HSD17B6O14756 317 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 GMDSO60547 372 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 OPN1MWP04001 364 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms