RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 BHLHE40O14503 412 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 RRHO14718 337 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 MSTNO14793 375 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CBR1P16152 277 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 RPS10P46783 165 aaKnown RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 CEBPDP49716 269 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 ZNF136P52737 540 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CD226Q15762 336 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ZNF79Q15937 498 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ISXQ2M1V0 245 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TMEM91Q6ZNR0 172 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 KCNRGQ8N5I3 272 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 SUMF2Q8NBJ7 301 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OR51F2Q8NH61 342 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OR1L3Q8NH93 324 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 RNF128Q8TEB7 428 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 SLC25A43Q8WUT9 341 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 PPP1R1CQ8WVI7 109 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CACNG8Q8WXS5 425 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ST8SIA1Q92185 356 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 MED30Q96HR3 178 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 THOC3Q96J01 351 aaKnown RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 TSPAN32Q96QS1 320 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 SLC25A31Q9H0C2 315 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 MEGF9Q9H1U4 602 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TMEM231Q9H6L2 316 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CACNA1HO95180 2353 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 WNK1Q9H4A3 2382 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 MYOFQ9NZM1 2061 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 SPTBN4Q9H254 2564 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CCDC88CQ9P219 2028 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 EPOPA6NHQ4 379 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 SNRPGP15A8MWD9 76 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 D6RAR5 112 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 M0R135 149 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 SLC17A2O00624 439 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 RER1O15258 196 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ANGPTL7O43827 346 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CXCL13O43927 109 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 GMDSO60547 372 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TXNDC12O95881 172 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CD63P08962 238 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CXCL3P19876 107 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 PEBP1P30086 187 aaKnown RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 DUTP33316 252 aaKnown RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 GABRA2P47869 451 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 RBP2P50120 134 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ZNF121P58317 390 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 CCL7P80098 99 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 S100A12P80511 92 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 MYBPHQ13203 477 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 GSG1Q2KHT4 349 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 AADACL3Q5VUY0 350 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 DMKNQ6E0U4 476 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 TMEM71Q6P5X7 295 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 VWA1Q6PCB0 445 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 SLC23A3Q6PIS1 610 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 Q6ZSR3 168 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ACOT7LQ6ZUV0 252 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 DUSP18Q8NEJ0 188 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OR10G3Q8NGC4 313 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OR5D13Q8NGL4 314 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OR14K1Q8NGZ2 314 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ZNF799Q96GE5 643 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OXGR1Q96P68 337 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CHRDL1Q9BU40 450 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 C20orf24Q9BUV8 137 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TAF9BQ9HBM6 251 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 NECAP2Q9NVZ3 263 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 C1RLQ9NZP8 487 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CES1P1Q9UKY3 287 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TIMM8BQ9Y5J9 83 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 DOPEY1Q5JWR5 2465 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 PLSCR5A0PG75 271 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 C9orf118A6NHY6 69 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CEBPZOSA8MTT3 80 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZNF814B7Z6K7 855 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 DIRC3C9JPN6 131 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZNF587BE7ETH6 402 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ATP6V1G2-DDX39BF2Z307 99 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 MS4A18H0YCH9 400 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SULT1C2O00338 296 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 HSD17B6O14756 317 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 TNFSF11O14788 317 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CHST1O43916 411 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ATG12O94817 140 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 GLSO94925 669 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 VAMP5O95183 116 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IFNA17P01571 189 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IGLV1-40P01703 118 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IGHG4P01861 327 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IRF2P14316 349 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 B4GALT1P15291 398 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CTLA4P16410 223 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SLC6A1P30531 599 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IDH3GP51553 393 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 SLC25A1P53007 311 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 BRWD1-AS2P59051 145 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 FOXL1Q12952 345 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZNF141Q15928 474 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms