RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 FAM234AQ9H0X4 552 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 PCDHB10Q9UN67 800 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 SETXQ7Z333 2677 aaKnown RBP14.31□□□□□ -0.12
SKP2-201ENST00000274254 A0A0A6YYH2 397 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 A6NJ64 397 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 RGS5O15539 181 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 OR3A1P47881 315 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 PLAC9Q5JTB6 97 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 ATAD3CQ5T2N8 411 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 NLRC3Q7RTR2 1065 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 OR8H2Q8N162 312 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 ASCC1Q8N9N2 400 aaKnown RBP14.31□□□□□ -0.12
SKP2-201ENST00000274254 SUMF2Q8NBJ7 301 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 OR8B3Q8NGG8 313 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 S100A16Q96FQ6 103 aaKnown RBP14.31□□□□□ -0.12
SKP2-201ENST00000274254 NEDD4LQ96PU5 975 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 OR8B2Q96RD0 313 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 DPCDQ9BVM2 203 aaPredicted RBP14.31□□□□□ -0.12
SKP2-201ENST00000274254 PTTG2Q9NZH5 202 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 HSF4Q9ULV5 492 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 PEX16Q9Y5Y5 336 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 VPS13CQ709C8 3753 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 CLPXO76031 633 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 TK1P04183 234 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 CSN2P05814 226 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 GLAP06280 429 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 USF1P22415 310 aaPredicted RBP14.3□□□□□ -0.12
SKP2-201ENST00000274254 CDK2P24941 298 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 PAN3Q58A45 887 aaKnown RBP14.3□□□□□ -0.12
SKP2-201ENST00000274254 C6orf201Q7Z4U5 140 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 RTN4RL2Q86UN3 420 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 OR4S1Q8NGB4 309 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 RAB3CQ96E17 227 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 ARHGAP5-AS1Q96IT6 56 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 CYYR1Q96J86 154 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 WDFY2Q96P53 400 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 CHST6Q9GZX3 395 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 PPA2Q9H2U2 334 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 KCNK7Q9Y2U2 307 aa14.3□□□□□ -0.12
SKP2-201ENST00000274254 HSPB6O14558 160 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 DVL1O14640 695 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 XRCC3O43542 346 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 SEC61A1P61619 476 aaKnown RBP14.29□□□□□ -0.12
SKP2-201ENST00000274254 LOXL1Q08397 574 aaPredicted RBP14.29□□□□□ -0.12
SKP2-201ENST00000274254 LRRC10Q5BKY1 277 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 NKAPLQ5M9Q1 402 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 BRICD5Q6PL45 260 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 Q6ZTK2 550 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 BPIFB2Q8N4F0 458 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 TMEM185AQ8NFB2 350 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 OR5D13Q8NGL4 314 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 PPP1R35Q8TAP8 253 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 RAB39BQ96DA2 213 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 SULT4A1Q9BR01 284 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 REG4Q9BYZ8 158 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 DIABLOQ9NR28 239 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 PLEKHJ1Q9NW61 149 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 SLC25A10Q9UBX3 287 aaPredicted RBP14.29□□□□□ -0.12
SKP2-201ENST00000274254 ADAM30Q9UKF2 790 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 ITPR3Q14573 2671 aa14.29□□□□□ -0.12
SKP2-201ENST00000274254 MCRIP1C9JLW8 97 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 MFNGO00587 321 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 NDUFB3O43676 98 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 HIST1H1DP16402 221 aaKnown RBP14.28□□□□□ -0.12
SKP2-201ENST00000274254 IL2RGP31785 369 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 KCNJ3P48549 501 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 NPY4RP50391 375 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 PAX5Q02548 391 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 GRK1Q15835 563 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 WDR25Q64LD2 544 aaPredicted RBP14.28□□□□□ -0.12
SKP2-201ENST00000274254 FGFRL1Q8N441 504 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 ST8SIA4Q92187 359 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 PHF21AQ96BD5 680 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 PECRQ9BY49 303 aa14.28□□□□□ -0.12
SKP2-201ENST00000274254 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.28□□□□□ -0.12
SKP2-201ENST00000274254 ABCA2Q9BZC7 2435 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 FAM25AB3EWG3 89 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 FAM25CB3EWG5 89 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 FAM25GB3EWG6 89 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 RNF223E7ERA6 249 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 MGST3O14880 152 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 GNB3P16520 340 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 TNFSF8P32971 234 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 RBM39Q14498 530 aaKnown RBP14.27□□□□□ -0.12
SKP2-201ENST00000274254 ZNF260Q3ZCT1 412 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 CNIH2Q6PI25 160 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 OR4M1Q8NGD0 313 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 OR6Q1Q8NGQ2 317 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 FAAP24Q9BTP7 215 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 SSBP3Q9BWW4 388 aaPredicted RBP14.27□□□□□ -0.12
SKP2-201ENST00000274254 CLN8Q9UBY8 286 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 ITGB1BP2Q9UKP3 347 aa14.27□□□□□ -0.12
SKP2-201ENST00000274254 GPR37O15354 613 aa14.26□□□□□ -0.13
SKP2-201ENST00000274254 S100A5P33763 92 aa14.26□□□□□ -0.13
SKP2-201ENST00000274254 ATXN7L3Q14CW9 347 aaPredicted RBP14.26□□□□□ -0.13
SKP2-201ENST00000274254 ARL6IP1Q15041 203 aa14.26□□□□□ -0.13
SKP2-201ENST00000274254 ESCO2Q56NI9 601 aa14.26□□□□□ -0.13
SKP2-201ENST00000274254 TMEM69Q5SWH9 247 aa14.26□□□□□ -0.13
SKP2-201ENST00000274254 OLFML2AQ68BL7 652 aa14.26□□□□□ -0.13
SKP2-201ENST00000274254 PLPPR1Q8TBJ4 325 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms