RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PSG11Q9UQ72 335 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 PPIL1Q9Y3C6 166 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 TMEM265A0A087WTH1 108 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 C5orf52A6NGY3 159 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 SIAH2O43255 324 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 FCGR3BO75015 233 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 SBK3P0C264 359 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 OR3A1P47881 315 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 HMGA2P52926 109 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 TMEM116Q8NCL8 245 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 MPC1Q9Y5U8 109 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 A0A1B0GU03 582 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 NFAM1Q8NET5 270 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-201ENST00000273317 NUDT8Q8WV74 236 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 UFC1Q9Y3C8 167 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 TRGV5A0A0B4J1U4 118 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 K7EQS6 105 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 HIST1H1BP16401 226 aaKnown RBP7.09□□□□□ -1.27
LIMD1-201ENST00000273317 DUSP2Q05923 314 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 ANKRD55Q3KP44 614 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.27
LIMD1-201ENST00000273317 COL5A3P25940 1745 aaPredicted RBP7.09□□□□□ -1.28
LIMD1-201ENST00000273317 IGHV3-64DA0A0J9YX35 117 aa7.09□□□□□ -1.28
LIMD1-201ENST00000273317 HOXA6P31267 233 aa7.09□□□□□ -1.28
LIMD1-201ENST00000273317 SRP14P37108 136 aaKnown RBP7.09□□□□□ -1.28
LIMD1-201ENST00000273317 FNDC7Q5VTL7 733 aa7.09□□□□□ -1.28
LIMD1-201ENST00000273317 BPIFA4PQ86YQ2 179 aa7.09□□□□□ -1.28
LIMD1-201ENST00000273317 SLC7A10Q9NS82 523 aa7.09□□□□□ -1.28
LIMD1-201ENST00000273317 CNOT1A5YKK6 2376 aaKnown RBP7.09□□□□□ -1.28
LIMD1-201ENST00000273317 HAND1O96004 215 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 LEUTXA8MZ59 168 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 CXCL10P02778 98 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 CDAP32320 146 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 PSMB2P49721 201 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 SPATA46Q5T0L3 261 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 SLC25A42Q86VD7 318 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 PECRQ9BY49 303 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 P01737 135 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 SSX1Q16384 188 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 ASCL5Q7RTU5 278 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 DEFB108BQ8NET1 73 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 CADM4Q8NFZ8 388 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 LRRC61Q9BV99 259 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 PTPRFP10586 1907 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 OR3A4PP47883 348 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 HLA-DRB5Q30154 266 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 OR1L6Q8NGR2 347 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 VAX2Q9UIW0 290 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 PITPNC1Q9UKF7 332 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 FBLL1A6NHQ2 334 aaKnown RBP7.08□□□□□ -1.28
LIMD1-201ENST00000273317 NPY1RP25929 384 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 DYNLT3P51808 116 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 LSM11P83369 360 aaKnown RBP eCLIP7.08□□□□□ -1.28
LIMD1-201ENST00000273317 FBXL6Q8N531 539 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 OR1B1Q8NGR6 318 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 OR1L3Q8NH93 324 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 MCHR2Q969V1 340 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 TMEM238LA0A1B0GVL6 79 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 ASPDHA6ND91 283 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 A6NJY4 79 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 APCSP02743 223 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF770Q6IQ21 691 aaPredicted RBP7.08□□□□□ -1.28
LIMD1-201ENST00000273317 FAM219AQ8IW50 185 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 OR5R1Q8NH85 324 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 PARP11Q9NR21 331 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 PRSS50Q9UI38 385 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 GBF1Q92538 1859 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 H3BP45 60 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 MFNGO00587 321 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 RPL30P62888 115 aaKnown RBP7.08□□□□□ -1.28
LIMD1-201ENST00000273317 ANKRD34AQ69YU3 496 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF774Q6NX45 483 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 ERRFI1Q9UJM3 462 aaPredicted RBP7.08□□□□□ -1.28
LIMD1-201ENST00000273317 NEU3Q9UQ49 428 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 AMDHD2Q9Y303 409 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 TMEM33P57088 247 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 YBX1P67809 324 aaKnown RBP7.08□□□□□ -1.28
LIMD1-201ENST00000273317 RAB32Q13637 225 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 TMEM211Q6ICI0 200 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 C9orf62Q8N4C0 152 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 ZBTB34Q8NCN2 500 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 OR4D10Q8NGI6 311 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 VN1R1Q9GZP7 353 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 SIRT5Q9NXA8 310 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 LY75O60449 1722 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 CASP8AP2Q9UKL3 1982 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 SPTY2D1-AS1A0A0U1RR47 76 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 OR10J1P30954 320 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 ISXQ2M1V0 245 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 LILRB1Q8NHL6 650 aaPredicted RBP7.08□□□□□ -1.28
LIMD1-201ENST00000273317 SLC26A1Q9H2B4 701 aa7.08□□□□□ -1.28
LIMD1-201ENST00000273317 NKG7Q16617 165 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 BSXQ3C1V8 233 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 RSPO2Q6UXX9 243 aaPredicted RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 NUBPLQ8TB37 319 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 RHNO1Q9BSD3 238 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 ANXA10Q9UJ72 324 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 XIRP1Q702N8 1843 aaKnown RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 DYRK2Q92630 601 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 TM4SF19Q96DZ7 209 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms