RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ATF1P18846 271 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 CDK2P24941 298 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 LMO1P25800 156 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 HTR1DP28221 377 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 PEX2P28328 305 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 AESQ08117 197 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 PDZK1IP1Q13113 114 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 CDK5R1Q15078 307 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 HLA-DRB5Q30154 266 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 VAX1Q5SQQ9 334 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 TPTE2P1Q5T6R2 138 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 AMIGO2Q86SJ2 522 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 GID4Q8IVV7 300 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 MRPL41Q8IXM3 137 aaKnown RBP7.09□□□□□ -1.27
TPM3-201ENST00000271850 DNAAF1Q8NEP3 725 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 OR10H4Q8NGA5 316 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 OR5D18Q8NGL1 313 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 OR2G2Q8NGZ5 317 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 RBMXL1Q96E39 390 aaKnown RBP7.09□□□□□ -1.27
TPM3-201ENST00000271850 MBOAT4Q96T53 435 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 TEX12Q9BXU0 123 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 GABARAPL3Q9BY60 117 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 COMMD4Q9H0A8 199 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 PLEKHA1Q9HB21 404 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 ZNF581Q9P0T4 197 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 DPM3Q9P2X0 92 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 WARS2Q9UGM6 360 aaKnown RBP7.09□□□□□ -1.27
TPM3-201ENST00000271850 GSTK1Q9Y2Q3 226 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 UBE2J1Q9Y385 318 aaPredicted RBP7.09□□□□□ -1.27
TPM3-201ENST00000271850 TSSC4Q9Y5U2 329 aaPredicted RBP7.09□□□□□ -1.27
TPM3-201ENST00000271850 RYR2Q92736 4967 aa7.09□□□□□ -1.27
TPM3-201ENST00000271850 LYSTQ99698 3801 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 A0A1W2PPI3 338 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 ODAMA1E959 279 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 BUB1B-PAK6H3BSN5 160 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 SLC33A1O00400 549 aaPredicted RBP7.08□□□□□ -1.28
TPM3-201ENST00000271850 GYG2O15488 501 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 DNAJC8O75937 253 aaPredicted RBP7.08□□□□□ -1.28
TPM3-201ENST00000271850 PF4V1P10720 104 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 HOXB6P17509 224 aaKnown RBP7.08□□□□□ -1.28
TPM3-201ENST00000271850 RBP2P50120 134 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 ZP1P60852 638 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 SPIN3Q5JUX0 258 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 UTS2BQ765I0 119 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 C16orf82Q7Z2V1 217 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 ZNF329Q86UD4 541 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 DTX3Q8N9I9 347 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 PP6455Q8WZ26 134 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 LEAP2Q969E1 77 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 FGGYQ96C11 551 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 C10orf35Q96D05 121 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 RCC1LQ96I51 464 aaKnown RBP7.08□□□□□ -1.28
TPM3-201ENST00000271850 NOL4LQ96MY1 436 aaPredicted RBP7.08□□□□□ -1.28
TPM3-201ENST00000271850 ZNF649Q9BS31 505 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 AASSQ9UDR5 926 aa7.08□□□□□ -1.28
TPM3-201ENST00000271850 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.08□□□□□ -1.28
TPM3-201ENST00000271850 LINC01548A6NM66 108 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 OR4C45A6NMZ5 311 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 G3V2T6 193 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 PEX14O75381 377 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 IGHV3-7P01780 117 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 ALDOBP05062 364 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 CSN2P05814 226 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 UBCP0CG48 685 aaKnown RBP7.07□□□□□ -1.28
TPM3-201ENST00000271850 ATP1B3P54709 279 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 MTCP1P56278 107 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 ACTR3P61158 418 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 SLC35A2P78381 396 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 ATXN7L3Q14CW9 347 aaPredicted RBP7.07□□□□□ -1.28
TPM3-201ENST00000271850 DNAL1Q4LDG9 190 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 FAM53AQ6NSI3 398 aaPredicted RBP7.07□□□□□ -1.28
TPM3-201ENST00000271850 FDX2Q6P4F2 183 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 CENPVQ7Z7K6 275 aaPredicted RBP7.07□□□□□ -1.28
TPM3-201ENST00000271850 TRAPPC6BQ86SZ2 158 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 RTN4RL2Q86UN3 420 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 Q8IYB0 196 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 ENTHD1Q8IYW4 607 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 OSR2Q8N2R0 312 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 OR13A1Q8NGR1 328 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 KIRREL1Q96J84 757 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 CYYR1Q96J86 154 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 OPALINQ96PE5 141 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 KRTAP4-2Q9BYR5 136 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 PRRG3Q9BZD7 231 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 EXOSC4Q9NPD3 245 aaKnown RBP7.07□□□□□ -1.28
TPM3-201ENST00000271850 ING3Q9NXR8 418 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 TAS2R3Q9NYW6 316 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 H2AFY2Q9P0M6 372 aaPredicted RBP7.07□□□□□ -1.28
TPM3-201ENST00000271850 LINC00527Q9UJ94 153 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 GNG8Q9UK08 70 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 CSMD3Q7Z407 3707 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 STARD9Q9P2P6 4700 aa7.07□□□□□ -1.28
TPM3-201ENST00000271850 TRGV10A0A0A0MS01 117 aa7.06□□□□□ -1.28
TPM3-201ENST00000271850 TRAV24A0A0B4J272 114 aa7.06□□□□□ -1.28
TPM3-201ENST00000271850 LEUTXA8MZ59 168 aa7.06□□□□□ -1.28
TPM3-201ENST00000271850 PF4P02776 101 aa7.06□□□□□ -1.28
TPM3-201ENST00000271850 MT-ND2P03891 347 aa7.06□□□□□ -1.28
TPM3-201ENST00000271850 ISG15P05161 165 aa7.06□□□□□ -1.28
TPM3-201ENST00000271850 SNRNP70P08621 437 aaKnown RBP7.06□□□□□ -1.28
TPM3-201ENST00000271850 CCDC159P0C7I6 412 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms