RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 BCL3P20749 454 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 CHATP28329 748 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 GCH1P30793 250 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 PMELP40967 661 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 MECP2P51608 486 aaKnown RBP20.75■□□□□ 0.91
SSBP4-201ENST00000270061 RBMS2Q15434 407 aaKnown RBP20.75■□□□□ 0.91
SSBP4-201ENST00000270061 PIGYQ3MUY2 71 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 MAPK1IP1LQ8NDC0 245 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 HPS1Q92902 700 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 SLAMF9Q96A28 289 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 ADAT1Q9BUB4 502 aaKnown RBP20.75■□□□□ 0.91
SSBP4-201ENST00000270061 YLPM1P49750 1951 aaKnown RBP20.75■□□□□ 0.91
SSBP4-201ENST00000270061 A0A1B0GWJ7 208 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 TMEM210A6NLX4 147 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 J3QT63 122 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 F12P00748 615 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-201ENST00000270061 ZNF735P0CB33 412 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 RAB25P57735 213 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 HAGHLQ6PII5 290 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-201ENST00000270061 C6orf201Q7Z4U5 140 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 SONP18583 2426 aaKnown RBP20.74■□□□□ 0.91
SSBP4-201ENST00000270061 IGHV4-30-2A0A087WSY4 118 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 TPD52L2O43399 206 aaKnown RBP20.74■□□□□ 0.91
SSBP4-201ENST00000270061 SYNGR1O43759 233 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 PEX14O75381 377 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 FCER2P06734 321 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 GLRXP35754 106 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 PPOXP50336 477 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 RGS7BPQ6MZT1 257 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-201ENST00000270061 OR4S1Q8NGB4 309 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 OR51S1Q8NGJ8 323 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 TINAGL1Q9GZM7 467 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-201ENST00000270061 SLC2A8Q9NY64 477 aa20.74■□□□□ 0.91
SSBP4-201ENST00000270061 PRAF2O60831 178 aa20.73■□□□□ 0.91
SSBP4-201ENST00000270061 LY6HO94772 140 aa20.73■□□□□ 0.91
SSBP4-201ENST00000270061 RPS23P62266 143 aaKnown RBP20.73■□□□□ 0.91
SSBP4-201ENST00000270061 OR8G1Q15617 311 aa20.73■□□□□ 0.91
SSBP4-201ENST00000270061 HOGA1Q86XE5 327 aa20.73■□□□□ 0.91
SSBP4-201ENST00000270061 OR10AD1Q8NGE0 317 aa20.73■□□□□ 0.91
SSBP4-201ENST00000270061 FAM168AQ92567 244 aa20.73■□□□□ 0.91
SSBP4-201ENST00000270061 GHITMQ9H3K2 345 aa20.73■□□□□ 0.91
SSBP4-201ENST00000270061 PDCD6O75340 191 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 ZNF250P15622 560 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 ZMYND11Q15326 602 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 ACTBL2Q562R1 376 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 RNASE10Q5GAN6 216 aaKnown RBP20.72■□□□□ 0.91
SSBP4-201ENST00000270061 WDR86Q86TI4 376 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 SPERTQ8NA61 448 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 SNAPC3Q92966 411 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 EMG1Q92979 244 aaKnown RBP20.72■□□□□ 0.91
SSBP4-201ENST00000270061 MRPL24Q96A35 216 aaKnown RBP20.72■□□□□ 0.91
SSBP4-201ENST00000270061 RAB1BQ9H0U4 201 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 NKIRAS2Q9NYR9 191 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 A0A0A6YYJ9 748 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-201ENST00000270061 DISC1C4P0D8 188 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 H3BUI4 141 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 M0QYG6 137 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 TIMM8AO60220 97 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-201ENST00000270061 CD300CQ08708 224 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 MPV17LQ2QL34 196 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 NKAPLQ5M9Q1 402 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 OR52W1Q6IF63 320 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 LINC00596Q86U02 117 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 BPIFB2Q8N4F0 458 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 SLC25A21Q9BQT8 299 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-201ENST00000270061 DYNLRB1Q9NP97 96 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 SCP2D1Q9UJQ7 156 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 FLVCR2Q9UPI3 526 aa20.72■□□□□ 0.91
SSBP4-201ENST00000270061 F8VVB4 439 aa20.71■□□□□ 0.91
SSBP4-201ENST00000270061 F8VWA3 439 aa20.71■□□□□ 0.91
SSBP4-201ENST00000270061 AMY2AP04746 511 aa20.71■□□□□ 0.91
SSBP4-201ENST00000270061 ACAA1P09110 424 aaPredicted RBP20.71■□□□□ 0.91
SSBP4-201ENST00000270061 FUT3P21217 361 aa20.71■□□□□ 0.91
SSBP4-201ENST00000270061 CYYR1Q96J86 154 aa20.71■□□□□ 0.91
SSBP4-201ENST00000270061 GINS4Q9BRT9 223 aa20.71■□□□□ 0.91
SSBP4-201ENST00000270061 FAAP24Q9BTP7 215 aa20.71■□□□□ 0.91
SSBP4-201ENST00000270061 MRPL37Q9BZE1 423 aaKnown RBP20.71■□□□□ 0.91
SSBP4-201ENST00000270061 POLDIP2Q9Y2S7 368 aa20.71■□□□□ 0.91
SSBP4-201ENST00000270061 BOLA2-SMG1P6H3BVE0 249 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 ARPC1BO15143 372 aaKnown RBP20.7■□□□□ 0.9
SSBP4-201ENST00000270061 MLNRO43193 412 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 CCNKO75909 580 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 SCCPDHQ8NBX0 429 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 OR13G1Q8NGZ3 307 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 OR6F1Q8NGZ6 308 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 OR4K15Q8NH41 348 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 MED30Q96HR3 178 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 SLC6A7Q99884 636 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 PRRT1Q99946 306 aa20.7■□□□□ 0.9
SSBP4-201ENST00000270061 IGHV3-13P01766 116 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 SLC25A16P16260 332 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 HRH1P35367 487 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 RRAS2P62070 204 aaPredicted RBP20.69■□□□□ 0.9
SSBP4-201ENST00000270061 MSMPQ1L6U9 139 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 VAX1Q5SQQ9 334 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 Q8IYB0 196 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 C10orf105Q8TEF2 133 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 GIMAP1Q8WWP7 306 aa20.69■□□□□ 0.9
SSBP4-201ENST00000270061 SULT4A1Q9BR01 284 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms