RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TMEM252Q8N6L7 170 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 NAT6Q93015 286 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 C11orf1Q9H5F2 150 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 SLC7A10Q9NS82 523 aa23.74■■□□□ 1.39
CBX4-201ENST00000269397 CELSR3Q9NYQ7 3312 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 TRDCB7Z8K6 153 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 ADAM20O43506 726 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 ZNF32P17041 273 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 TCN2P20062 427 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 NPBWR2P48146 333 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 DYNLT3P51808 116 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 ERVFRD-1P60508 538 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 PDZD11Q5EBL8 140 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 GUSBP11Q6P575 273 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 LHFPL2Q6ZUX7 228 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 TBC1D26Q86UD7 250 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 CALHM1Q8IU99 346 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 OR1F12Q8NHA8 337 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 TGIF2-C20orf24A0A0A6YYL0 155 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 PDCD6O75340 191 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 SRP19P09132 144 aaKnown RBP23.73■■□□□ 1.39
CBX4-201ENST00000269397 MAS1LP35410 378 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 ZNF468Q5VIY5 522 aaPredicted RBP23.73■■□□□ 1.39
CBX4-201ENST00000269397 TMEM222Q9H0R3 208 aa23.73■■□□□ 1.39
CBX4-201ENST00000269397 A0A1B0GW64 132 aa23.72■■□□□ 1.39
CBX4-201ENST00000269397 ZIC3O60481 467 aa23.72■■□□□ 1.39
CBX4-201ENST00000269397 TMEM50AO95807 157 aa23.72■■□□□ 1.39
CBX4-201ENST00000269397 ZNF92Q03936 586 aa23.72■■□□□ 1.39
CBX4-201ENST00000269397 RAB35Q15286 201 aa23.72■■□□□ 1.39
CBX4-201ENST00000269397 ELOBQ15370 118 aa23.72■■□□□ 1.39
CBX4-201ENST00000269397 RAB30Q15771 203 aa23.72■■□□□ 1.39
CBX4-201ENST00000269397 PLCXD3Q63HM9 321 aa23.72■■□□□ 1.39
CBX4-201ENST00000269397 ZNF429Q86V71 674 aa23.72■■□□□ 1.39
CBX4-201ENST00000269397 MRPS34P82930 218 aaKnown RBP23.72■■□□□ 1.39
CBX4-201ENST00000269397 ZNF385CQ66K41 422 aaPredicted RBP23.72■■□□□ 1.39
CBX4-201ENST00000269397 SPNS3Q6ZMD2 512 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 FGFBP3Q8TAT2 258 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 DKKL1Q9UK85 242 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 PITX3O75364 302 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 UCP3P55916 312 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 VAMP2P63027 116 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 ICAM4Q14773 271 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 ODF3L1Q8IXM7 274 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 PLEKHF2Q9H8W4 249 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 CEP192Q8TEP8 1941 aa23.71■■□□□ 1.39
CBX4-201ENST00000269397 ZNF407Q9C0G0 2248 aa23.7■■□□□ 1.39
CBX4-201ENST00000269397 A0A1W2PQM1 296 aa23.7■■□□□ 1.39
CBX4-201ENST00000269397 BCAT2O15382 392 aaPredicted RBP23.7■■□□□ 1.39
CBX4-201ENST00000269397 DAZAP2Q15038 168 aaPredicted RBP23.7■■□□□ 1.39
CBX4-201ENST00000269397 ASCL4Q6XD76 172 aa23.7■■□□□ 1.39
CBX4-201ENST00000269397 PARPBPQ9NWS1 579 aa23.7■■□□□ 1.39
CBX4-201ENST00000269397 HSPB6O14558 160 aa23.7■■□□□ 1.38
CBX4-201ENST00000269397 FKBP2P26885 142 aaKnown RBP23.7■■□□□ 1.38
CBX4-201ENST00000269397 CDX1P47902 265 aaPredicted RBP23.7■■□□□ 1.38
CBX4-201ENST00000269397 ZNF154Q13106 437 aa23.7■■□□□ 1.38
CBX4-201ENST00000269397 GFI1BQ5VTD9 330 aa23.7■■□□□ 1.38
CBX4-201ENST00000269397 HS3ST3B1Q9Y662 390 aa23.7■■□□□ 1.38
CBX4-201ENST00000269397 VAMP5O95183 116 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 CDS2O95674 445 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 JMJD7P0C870 316 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 RBM11P57052 281 aaKnown RBP23.69■■□□□ 1.38
CBX4-201ENST00000269397 ZNF818PQ6ZRF7 136 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 SLC25A26Q70HW3 274 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 PFDN5Q99471 154 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 LYRM2Q9NU23 88 aaPredicted RBP23.69■■□□□ 1.38
CBX4-201ENST00000269397 C19orf25Q9UFG5 118 aaPredicted RBP23.69■■□□□ 1.38
CBX4-201ENST00000269397 WSB1Q9Y6I7 421 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 CCL7P80098 99 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 DPPA2Q7Z7J5 298 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 ZNF100Q8IYN0 542 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 PROK2Q9HC23 129 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 KIAA1456Q9P272 454 aa23.69■■□□□ 1.38
CBX4-201ENST00000269397 CYB5BO43169 146 aa23.68■■□□□ 1.38
CBX4-201ENST00000269397 TNFSF12O43508 249 aa23.68■■□□□ 1.38
CBX4-201ENST00000269397 SCAF4O95104 1147 aaKnown RBP23.68■■□□□ 1.38
CBX4-201ENST00000269397 LIFP15018 202 aa23.68■■□□□ 1.38
CBX4-201ENST00000269397 SELENOHQ8IZQ5 122 aaKnown RBP23.68■■□□□ 1.38
CBX4-201ENST00000269397 GAPTQ8N292 157 aa23.68■■□□□ 1.38
CBX4-201ENST00000269397 LY86O95711 162 aa23.68■■□□□ 1.38
CBX4-201ENST00000269397 FUT3P21217 361 aa23.68■■□□□ 1.38
CBX4-201ENST00000269397 S100A2P29034 98 aa23.68■■□□□ 1.38
CBX4-201ENST00000269397 ZNF611Q8N823 705 aa23.68■■□□□ 1.38
CBX4-201ENST00000269397 CCDC54Q8NEL0 328 aa23.68■■□□□ 1.38
CBX4-201ENST00000269397 ZNF587BE7ETH6 402 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 H3BP45 60 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 HSPA12AO43301 675 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 SCTP09683 121 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 PSG4Q00888 419 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 ZNF610Q8N9Z0 462 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 ZNF383Q8NA42 475 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 IGHV5-10-1A0A0J9YXX1 117 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 OCIAD1Q9NX40 245 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 GAR1Q9NY12 217 aaKnown RBP23.67■■□□□ 1.38
CBX4-201ENST00000269397 DMRT1Q9Y5R6 373 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 IGKV1D-13A0A0B4J2D9 117 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 IGKV1-13P0DP09 117 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 PCOLCEQ15113 449 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 TMEM42Q69YG0 159 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 GPR137CQ8N3F9 429 aa23.67■■□□□ 1.38
CBX4-201ENST00000269397 OR10D4PQ8NGN7 298 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms