RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SERPINF1P36955 418 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 MBNL2Q5VZF2 373 aaKnown RBP14.13□□□□□ -0.15
CCDC40-201ENST00000269318 Q6P435 159 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 TMEM65Q6PI78 240 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 Q8IYB0 196 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 C1orf174Q8IYL3 243 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 CISD2Q8N5K1 135 aaKnown RBP14.13□□□□□ -0.15
CCDC40-201ENST00000269318 PPP1R1CQ8WVI7 109 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 RAB18Q9NP72 206 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 TINAGQ9UJW2 476 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 CRYM-AS1A6NIL9 109 aa14.12□□□□□ -0.15
CCDC40-201ENST00000269318 FAM25EA8MYX2 175 aa14.12□□□□□ -0.15
CCDC40-201ENST00000269318 CDIPTO14735 213 aa14.12□□□□□ -0.15
CCDC40-201ENST00000269318 SLC25A4P12235 298 aa14.12□□□□□ -0.15
CCDC40-201ENST00000269318 S100A11P31949 105 aa14.12□□□□□ -0.15
CCDC40-201ENST00000269318 NAAAQ02083 359 aa14.12□□□□□ -0.15
CCDC40-201ENST00000269318 IGSF11Q5DX21 431 aa14.12□□□□□ -0.15
CCDC40-201ENST00000269318 MOB3AQ96BX8 217 aa14.12□□□□□ -0.15
CCDC40-201ENST00000269318 TRBV6-6A0A0A6YYG2 114 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 A0A1B0GWJ7 208 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 CFDP00746 253 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-201ENST00000269318 ACAA1P09110 424 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-201ENST00000269318 ZNF728P0DKX0 622 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 UCP3P55916 312 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 ZNF718Q3SXZ3 478 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 C11orf87Q6NUJ2 197 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 GSG1LQ6UXU4 331 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 Q6ZR03 302 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 TMUB2Q71RG4 321 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 DOLPP1Q86YN1 238 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 MRPL30Q8TCC3 161 aaKnown RBP14.11□□□□□ -0.15
CCDC40-201ENST00000269318 RIMS4Q9H426 269 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-201ENST00000269318 PRR14LQ5THK1 2151 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 CEP295Q9C0D2 2601 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 EEF1E1-BLOC1S5C9J1V9 151 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 HS3ST1O14792 307 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 ADAP1O75689 374 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 IFNA2P01563 188 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 EXOSC2Q13868 293 aaKnown RBP14.11□□□□□ -0.15
CCDC40-201ENST00000269318 C3orf36Q3SXR2 165 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 NEK7Q8TDX7 302 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 RDH5Q92781 318 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 TOMM40LQ969M1 308 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 NMES1Q9C002 83 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 COMMD9Q9P000 198 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 FZR1Q9UM11 496 aa14.11□□□□□ -0.15
CCDC40-201ENST00000269318 ACACAQ13085 2346 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 C5orf51A6NDU8 294 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 A8MXE2 369 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 ERVH48-1M5A8F1 160 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 GRPP07492 148 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 AADACP22760 399 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 GLP1RP43220 463 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 FABP6P51161 128 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 ZNF880Q6PDB4 577 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 C20orf204Q6ZNR8 217 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 C5orf24Q7Z6I8 188 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 ZNF546Q86UE3 836 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 C11orf53Q8IXP5 236 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 PIK3IP1Q96FE7 263 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 MFFQ9GZY8 342 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 ATP23Q9Y6H3 246 aa14.1□□□□□ -0.15
CCDC40-201ENST00000269318 IGHV3-64DA0A0J9YX35 117 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 C13orf42A0A1B0GVH6 325 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 TRDCB7Z8K6 153 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 DEGS1O15121 323 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 TIMM8AO60220 97 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-201ENST00000269318 SCTP09683 121 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 ZNF83P51522 516 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 PIGPP57054 158 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 FXYD4P59646 89 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 RBM39Q14498 530 aaKnown RBP14.09□□□□□ -0.15
CCDC40-201ENST00000269318 HERPUD1Q15011 391 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 ZNF146Q15072 292 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 LRRC37A5PQ49AS3 106 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 SGPP2Q8IWX5 399 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 TLNRD1Q9H1K6 362 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 CXXC4Q9H2H0 198 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 HES4Q9HCC6 221 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 RDH8Q9NYR8 311 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 TNFSF18Q9UNG2 199 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-201ENST00000269318 KIR2DS1A0A191URI9 304 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 MPTX1A8MV57 137 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 PRRG2O14669 202 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 PPYP01298 95 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 IFNA7P01567 189 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 S100A1P23297 94 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 GCH1P30793 250 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 PLA2G5P39877 138 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 KIR2DS4P43632 304 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 KIR2DS1Q14954 304 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 MSMPQ1L6U9 139 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 SLC38A6Q8IZM9 456 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 POC1AQ8NBT0 407 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 RSRP1Q9BUV0 290 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 ARL6Q9H0F7 186 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 ZNF835Q9Y2P0 537 aa14.09□□□□□ -0.15
CCDC40-201ENST00000269318 IGKV1-6A0A0C4DH72 117 aa14.08□□□□□ -0.16
CCDC40-201ENST00000269318 C1QTNF9BB2RNN3 333 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms