RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PMCHL1Q16048 86 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 RTL8BQ17RB0 113 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 C17orf78Q8N4C9 275 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 SPSB1Q96BD6 273 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 LIPGQ9Y5X9 500 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 C2orf16Q68DN1 1984 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 GLI3P10071 1580 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 LAIR1Q6GTX8 287 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 ARRDC3Q96B67 414 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 P4HTMQ9NXG6 502 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 ZNF391Q9UJN7 358 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 DENND4CQ5VZ89 1909 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 AGAP20933 346 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 CLDN15P56746 228 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 GABRA6Q16445 453 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 COX19Q49B96 90 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 CYB561D1Q8N8Q1 229 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 SUMF1Q8NBK3 374 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 RLFQ13129 1914 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 ZFPL1O95159 310 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 PPICP45877 212 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 SUMO3P55854 103 aaPredicted RBP5.09□□□□□ -1.59
VCAN-201ENST00000265077 UBE2G1P62253 170 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 FAM27D1Q5T7N8 215 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 TMEM251Q8N6I4 163 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 OR13G1Q8NGZ3 307 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 OTOSQ8NHW6 89 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 MARCH1Q8TCQ1 289 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 RTN4IP1Q8WWV3 396 aaPredicted RBP5.09□□□□□ -1.59
VCAN-201ENST00000265077 ANAPC13Q9BS18 74 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 PLXNA2O75051 1894 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 FNDC1Q4ZHG4 1894 aaPredicted RBP5.09□□□□□ -1.59
VCAN-201ENST00000265077 A0A0B4J2E0 115 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 A0A1B0GX12 115 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 FRG2CA6NGY1 282 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 COLCA2A8K830 154 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 SLC17A2O00624 439 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 CHEK1O14757 476 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 EREGO14944 169 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 LANCL1O43813 399 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 LSRQ86X29 649 aaPredicted RBP5.09□□□□□ -1.59
VCAN-201ENST00000265077 OR4S1Q8NGB4 309 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 BAHD1Q8TBE0 780 aaPredicted RBP5.09□□□□□ -1.59
VCAN-201ENST00000265077 RTL8AQ9BWD3 113 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 MSL2Q9HCI7 577 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 HIF1ANQ9NWT6 349 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 A0A0A6YYD5 115 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 TMEM202A6NGA9 273 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 NPY1RP25929 384 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 AESQ08117 197 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 IL24Q13007 206 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 SLC25A30Q5SVS4 291 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 TPTE2P1Q5T6R2 138 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 C8orf82Q6P1X6 216 aaPredicted RBP5.09□□□□□ -1.59
VCAN-201ENST00000265077 HIST3H2BBQ8N257 126 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 OXGR1Q96P68 337 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 PRSS50Q9UI38 385 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 TIMM10BQ9Y5J6 103 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 HCFC2Q9Y5Z7 792 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 NPTNQ9Y639 398 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 OR2A4O95047 310 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 DEFA4P12838 97 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 TGIF1Q15583 401 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 ACKR1Q16570 336 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 OR5A2Q8NGI9 324 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 C16orf52Q8NHV5 167 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 MBD3L1Q8WWY6 194 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 PP6455Q8WZ26 134 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 DERL3Q96Q80 235 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 OR2A7Q96R45 310 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 OR6C1Q96RD1 312 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 ADGRL4Q9HBW9 690 aa5.09□□□□□ -1.59
VCAN-201ENST00000265077 ZIC2O95409 532 aaPredicted RBP5.09□□□□□ -1.6
VCAN-201ENST00000265077 FGF5P12034 268 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 GLIPR1P48060 266 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 PLPPR5Q32ZL2 321 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 PYY3Q5JQD4 70 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 SPANXN5Q5MJ07 72 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 PRAMEF5Q5TYX0 476 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 DCAF12L2Q5VW00 463 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 PRAMEF6Q5VXH4 476 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 ASTLQ6HA08 431 aaPredicted RBP5.09□□□□□ -1.6
VCAN-201ENST00000265077 ZNF774Q6NX45 483 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 SHISA6Q6ZSJ9 500 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 EID2BQ96D98 161 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 RAB40CQ96S21 281 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 OR5AC2Q9NZP5 309 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 ZNF107Q9UII5 783 aaPredicted RBP5.09□□□□□ -1.6
VCAN-201ENST00000265077 XRCC2O43543 280 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 SRP14P37108 136 aaKnown RBP5.09□□□□□ -1.6
VCAN-201ENST00000265077 LPAR6P43657 344 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 CYB561P49447 251 aa5.09□□□□□ -1.6
VCAN-201ENST00000265077 ETHE1O95571 254 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 DUS4LO95620 317 aaKnown RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 CXCL12P48061 93 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 FUT6P51993 359 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 SLCO1C1Q9NYB5 712 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 B9D1Q9UPM9 204 aa5.08□□□□□ -1.6
VCAN-201ENST00000265077 CHTOPQ9Y3Y2 248 aaKnown RBP5.08□□□□□ -1.6
VCAN-201ENST00000265077 LOC102723971A0A1B0GUV8 181 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms