RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 RTL8AQ9BWD3 113 aa17.28■□□□□ 0.36
CSPG5-201ENST00000264723 KIR2DS1A0A191URI9 304 aa17.28■□□□□ 0.36
CSPG5-201ENST00000264723 PTGER4P35408 488 aa17.28■□□□□ 0.36
CSPG5-201ENST00000264723 ALDH3B1P43353 468 aa17.28■□□□□ 0.36
CSPG5-201ENST00000264723 KIR2DS4P43632 304 aa17.28■□□□□ 0.36
CSPG5-201ENST00000264723 KIAA0141Q14154 515 aaPredicted RBP17.28■□□□□ 0.36
CSPG5-201ENST00000264723 KIR2DS1Q14954 304 aa17.28■□□□□ 0.36
CSPG5-201ENST00000264723 OR6S1Q8NH40 331 aa17.28■□□□□ 0.36
CSPG5-201ENST00000264723 KIAA2026Q5HYC2 2103 aa17.28■□□□□ 0.36
CSPG5-201ENST00000264723 H7C1Q1 480 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 ZNF573Q86YE8 665 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 OR2M7Q8NG81 312 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 FAM131CQ96AQ9 280 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 PLK3Q9H4B4 646 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 IL2RAP01589 272 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 CD8AP01732 235 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 AADACP22760 399 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 CASP6P55212 293 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 HIKESHIQ53FT3 197 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 CHRNA10Q9GZZ6 450 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 NAA60Q9H7X0 242 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 SLC2A9Q9NRM0 540 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 SLC7A10Q9NS82 523 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 C19orf12Q9NSK7 152 aa17.27■□□□□ 0.36
CSPG5-201ENST00000264723 A0A1W2PPH5 198 aa17.27■□□□□ 0.35
CSPG5-201ENST00000264723 ADAM20O43506 726 aa17.27■□□□□ 0.35
CSPG5-201ENST00000264723 GSK3AP49840 483 aa17.27■□□□□ 0.35
CSPG5-201ENST00000264723 ZNF266Q14584 549 aa17.27■□□□□ 0.35
CSPG5-201ENST00000264723 USF2Q15853 346 aaPredicted RBP17.27■□□□□ 0.35
CSPG5-201ENST00000264723 SLC25A47Q6Q0C1 308 aa17.27■□□□□ 0.35
CSPG5-201ENST00000264723 IL34Q6ZMJ4 242 aa17.27■□□□□ 0.35
CSPG5-201ENST00000264723 GPR35Q9HC97 309 aa17.27■□□□□ 0.35
CSPG5-201ENST00000264723 PCNX2A6NKB5 2137 aa17.27■□□□□ 0.35
CSPG5-201ENST00000264723 PTAFRP25105 342 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 CSRP2Q16527 193 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 SPANXN5Q5MJ07 72 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 POC1BQ8TC44 478 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 NRIP2Q9BQI9 281 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 ANGPTL4Q9BY76 406 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 CLDN1O95832 211 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 TSC22D1Q15714 1073 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 AWAT1Q58HT5 328 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 RFESDQ8TAC1 157 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 TMEM38BQ9NVV0 291 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 IGSF11Q5DX21 431 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 OR5C1Q8NGR4 320 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 CHST5Q9GZS9 411 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 B3GAT1Q9P2W7 334 aa17.26■□□□□ 0.35
CSPG5-201ENST00000264723 XIRP2A4UGR9 3374 aa17.25■□□□□ 0.35
CSPG5-201ENST00000264723 A0A0A6YYD4 124 aa17.25■□□□□ 0.35
CSPG5-201ENST00000264723 UNKLQ9H9P5 680 aaKnown RBP17.25■□□□□ 0.35
CSPG5-201ENST00000264723 DYNLRB1Q9NP97 96 aa17.25■□□□□ 0.35
CSPG5-201ENST00000264723 ZNF107Q9UII5 783 aaPredicted RBP17.25■□□□□ 0.35
CSPG5-201ENST00000264723 IGKV1-9A0A0C4DH69 117 aa17.25■□□□□ 0.35
CSPG5-201ENST00000264723 ECI1P42126 302 aa17.25■□□□□ 0.35
CSPG5-201ENST00000264723 WDFY1Q8IWB7 410 aa17.25■□□□□ 0.35
CSPG5-201ENST00000264723 ZNF488Q96MN9 340 aa17.25■□□□□ 0.35
CSPG5-201ENST00000264723 INTS1Q8N201 2190 aaKnown RBP17.25■□□□□ 0.35
CSPG5-201ENST00000264723 DNASE2O00115 360 aaPredicted RBP17.25■□□□□ 0.35
CSPG5-201ENST00000264723 MECP2P51608 486 aaKnown RBP17.25■□□□□ 0.35
CSPG5-201ENST00000264723 DVL1P1P54792 670 aaPredicted RBP17.25■□□□□ 0.35
CSPG5-201ENST00000264723 DHODHQ02127 395 aa17.25■□□□□ 0.35
CSPG5-201ENST00000264723 FABP9Q0Z7S8 132 aa17.25■□□□□ 0.35
CSPG5-201ENST00000264723 A0A1W2PPE2 198 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 M0R1B8 84 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 NKX2-8O15522 239 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 VAX1Q5SQQ9 334 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 HIST2H3AQ71DI3 136 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 DMBX1Q8NFW5 382 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 RBMXL1Q96E39 390 aaKnown RBP17.24■□□□□ 0.35
CSPG5-201ENST00000264723 PFDN5Q99471 154 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 NIPSNAP3BQ9BS92 247 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 GPR87Q9BY21 358 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 CHCHD2Q9Y6H1 151 aaPredicted RBP17.24■□□□□ 0.35
CSPG5-201ENST00000264723 TRAV17A0A0B4J275 112 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 B4E171 279 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 TSPAN7P41732 249 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 NKX6-1P78426 367 aaPredicted RBP17.24■□□□□ 0.35
CSPG5-201ENST00000264723 OR8B8Q15620 311 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 NFAM1Q8NET5 270 aaPredicted RBP17.24■□□□□ 0.35
CSPG5-201ENST00000264723 RNF126Q9BV68 326 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 SRXN1Q9BYN0 137 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 OR2H1Q9GZK4 316 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 IGKV1D-8A0A087WSZ0 117 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 A0A0G2JMM0 328 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 A0A1W2PPB8 328 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 A0A1W2PRS3 328 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 NKX2-6A6NCS4 301 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 KIR3DP1A8MWS1 328 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 ERVK-16P61578 105 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 PSG4Q00888 419 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 HIST2H3PS2Q5TEC6 136 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 SSX9Q7RTT3 188 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 NECAP1Q8NC96 275 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 SF3B5Q9BWJ5 86 aaKnown RBP17.24■□□□□ 0.35
CSPG5-201ENST00000264723 PROCRQ9UNN8 238 aa17.24■□□□□ 0.35
CSPG5-201ENST00000264723 ARPC4-TTLL3A0A0A6YYG9 625 aa17.23■□□□□ 0.35
CSPG5-201ENST00000264723 PDCD6O75340 191 aa17.23■□□□□ 0.35
CSPG5-201ENST00000264723 IGHV3-13P01766 116 aa17.23■□□□□ 0.35
CSPG5-201ENST00000264723 IGHV3-7P01780 117 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms