RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 BET1LQ9NYM9 111 aa13.26□□□□□ -0.29
CASC3-201ENST00000264645 RNF24Q9Y225 148 aa13.26□□□□□ -0.29
CASC3-201ENST00000264645 PDCD11Q14690 1871 aaKnown RBP13.26□□□□□ -0.29
CASC3-201ENST00000264645 GBF1Q92538 1859 aa13.26□□□□□ -0.29
CASC3-201ENST00000264645 RBBP6Q7Z6E9 1792 aaKnown RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 AQP7P3A6NL99 342 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 CD38P28907 300 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 GLIPR1P48060 266 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 EDDM3BP56851 147 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 MRPL30Q8TCC3 161 aaKnown RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 STARD4Q96DR4 205 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 DAZAP1Q96EP5 407 aaKnown RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 CDH20Q9HBT6 801 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 MPDZO75970 2070 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 ANKRD36A6QL64 1941 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 TDRD15B5MCY1 1934 aaKnown RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 ZNF814B7Z6K7 855 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 E9PQ18 207 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 RPS4Y1P22090 263 aaKnown RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 GPR3P46089 330 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 FAM3BP58499 235 aaPredicted RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 TMEM196Q5HYL7 178 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 LANCL3Q6ZV70 420 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 OR5AU1Q8NGC0 362 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 OR52M1Q8NGK5 317 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 NAGKQ9UJ70 344 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 PTRH2Q9Y3E5 179 aaKnown RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 LCTP09848 1927 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 A0A1B0GX78 115 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 F8VVB4 439 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 F8VWA3 439 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 TRAF3IP2O43734 574 aaPredicted RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 DMRTA1Q5VZB9 504 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 TCTEX1D1Q8N7M0 179 aa13.25□□□□□ -0.29
CASC3-201ENST00000264645 ALKBH3Q96Q83 286 aaPredicted RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 NOSIPQ9Y314 301 aaKnown RBP13.25□□□□□ -0.29
CASC3-201ENST00000264645 DRD1P21728 446 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 CXorf66Q5JRM2 361 aaPredicted RBP13.24□□□□□ -0.29
CASC3-201ENST00000264645 GAPTQ8N292 157 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 RBM14Q96PK6 669 aaKnown RBP13.24□□□□□ -0.29
CASC3-201ENST00000264645 NRXN2Q9P2S2 1712 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 HEATR5BQ9P2D3 2071 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 AGAP20933 346 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 OR1D5P58170 312 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 PTCRAQ6ISU1 281 aaPredicted RBP13.24□□□□□ -0.29
CASC3-201ENST00000264645 ASB10Q8WXI3 467 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 HLA-CQ95604 372 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 MRGPRX4Q96LA9 322 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 GPHA2Q96T91 129 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 AICDAQ9GZX7 198 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 LIN7CQ9NUP9 197 aaKnown RBP13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST1H2BKO60814 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST1H2BJP06899 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST1H2BOP23527 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST1H2BBP33778 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST1H2BDP58876 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 UBE2NP61088 152 aaKnown RBP13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST1H2BCP62807 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 ZNF816Q0VGE8 651 aaPredicted RBP13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST2H2BEQ16778 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST1H2BHQ93079 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST1H2BNQ99877 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 HIST1H2BMQ99879 126 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 IGKV1D-42A0A075B6H8 117 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 SIRPB1O00241 398 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 SYNGR2O43760 224 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 PAGE4O60829 102 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 SCRG1O75711 98 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 GDF1P27539 372 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 UNC119Q13432 240 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 PRAMEF5Q5TYX0 476 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 PRAMEF6Q5VXH4 476 aa13.24□□□□□ -0.29
CASC3-201ENST00000264645 PATE4P0C8F1 98 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 EN2P19622 333 aaPredicted RBP13.23□□□□□ -0.29
CASC3-201ENST00000264645 GABRA2P47869 451 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 FUT6P51993 359 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 NUFIP2Q7Z417 695 aaKnown RBP13.23□□□□□ -0.29
CASC3-201ENST00000264645 OBP2BQ9NPH6 170 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 COL11A2P13942 1736 aaPredicted RBP13.23□□□□□ -0.29
CASC3-201ENST00000264645 VAMP5O95183 116 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 FOLR2P14207 255 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 SPINK2P20155 84 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 TNFRSF4P43489 277 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 SFTPA2Q8IWL1 248 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 H1FOOQ8IZA3 346 aaPredicted RBP13.23□□□□□ -0.29
CASC3-201ENST00000264645 PHOSPHO2Q8TCD6 241 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 TOX2Q96NM4 488 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 CCL28Q9NRJ3 127 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.23□□□□□ -0.29
CASC3-201ENST00000264645 ZNF253O75346 499 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 TOX4O94842 621 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 SNRPCP09234 159 aaKnown RBP13.23□□□□□ -0.29
CASC3-201ENST00000264645 MDH2P40926 338 aaKnown RBP13.23□□□□□ -0.29
CASC3-201ENST00000264645 CAPZBP47756 277 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 SLC24A4Q8NFF2 622 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 OR1N1Q8NGS0 311 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 OR5B3Q8NH48 314 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 HSPB9Q9BQS6 159 aa13.23□□□□□ -0.29
CASC3-201ENST00000264645 MRPS17Q9Y2R5 130 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms