RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 IGHV2-26A0A0B4J1V2 119 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 SLC33A1O00400 549 aaPredicted RBP12.98□□□□□ -0.33
USE1-201ENST00000263897 CHST1O43916 411 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 ALDOBP05062 364 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 CSN2P05814 226 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 MYL12AP19105 171 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 PLA1AQ53H76 456 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 MINOS1Q5TGZ0 78 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 ASCL4Q6XD76 172 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 SATL1Q86VE3 508 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 DTX3Q8N9I9 347 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 OR4C13Q8NGP0 309 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 GGHQ92820 318 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 TMEM106AQ96A25 262 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 CPNE2Q96FN4 548 aaPredicted RBP12.98□□□□□ -0.33
USE1-201ENST00000263897 GPER1Q99527 375 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 GAL3ST2Q9H3Q3 398 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 RANBP3Q9H6Z4 567 aaPredicted RBP12.98□□□□□ -0.33
USE1-201ENST00000263897 CHCHD3Q9NX63 227 aaKnown RBP12.98□□□□□ -0.33
USE1-201ENST00000263897 TAS2R4Q9NYW5 299 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 ZNF281Q9Y2X9 895 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 SIGLEC9Q9Y336 463 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 MINOS1-NBL1R4GNA1 71 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
USE1-201ENST00000263897 NOTCH1P46531 2555 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 ODAMA1E959 279 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 GABRPO00591 440 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 LALBAP00709 142 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 CDK2P24941 298 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 DYNLT3P51808 116 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 EFNB2P52799 333 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 KRBOX4Q5JUW0 171 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 OR52W1Q6IF63 320 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 C11orf88Q6PI97 169 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 CCBE1Q6UXH8 406 aaPredicted RBP12.97□□□□□ -0.33
USE1-201ENST00000263897 HEPN1Q6WQI6 88 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 ABHD12Q8N2K0 398 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 Q8NFD4 153 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 OR51T1Q8NGJ9 327 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 OR52N1Q8NH53 320 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 TNFAIP8L1Q8WVP5 186 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 COQ2Q96H96 371 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 NR1H4Q96RI1 486 aaPredicted RBP12.97□□□□□ -0.33
USE1-201ENST00000263897 NPFFR1Q9GZQ6 430 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 ABCB10Q9NRK6 738 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 TCF19Q9Y242 345 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 HILPDAQ9Y5L2 63 aa12.97□□□□□ -0.33
USE1-201ENST00000263897 A6NDX4 124 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 HTR1DP28221 377 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 PTGFRP43088 359 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 ST3GAL4Q11206 333 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 MED21Q13503 144 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 RSU1Q15404 277 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 OGFRL1Q5TC84 451 aaPredicted RBP12.96□□□□□ -0.33
USE1-201ENST00000263897 PRAMEF5Q5TYX0 476 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 DMKNQ6E0U4 476 aaPredicted RBP12.96□□□□□ -0.33
USE1-201ENST00000263897 BAIAP2L2Q6UXY1 529 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 RTN4RL2Q86UN3 420 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 ZNF485Q8NCK3 441 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 OR2T6Q8NHC8 308 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 NDNFQ8TB73 568 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 GHSRQ92847 366 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 SMIM19Q96E16 107 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 TMEM138Q9NPI0 162 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 ING3Q9NXR8 418 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 PITPNC1Q9UKF7 332 aa12.96□□□□□ -0.33
USE1-201ENST00000263897 H0YJX3 145 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 CASQ2O14958 399 aaPredicted RBP12.95□□□□□ -0.34
USE1-201ENST00000263897 GNAO1P09471 354 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 JUNBP17275 347 aaPredicted RBP12.95□□□□□ -0.34
USE1-201ENST00000263897 CAPGP40121 348 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 ATXN7L3Q14CW9 347 aaPredicted RBP12.95□□□□□ -0.34
USE1-201ENST00000263897 LAIR2Q6ISS4 152 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 C8orf59Q8N0T1 100 aaPredicted RBP12.95□□□□□ -0.34
USE1-201ENST00000263897 OR4P4Q8NGL7 312 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 OR10K1Q8NGX5 313 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 MMP27Q9H306 513 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 NCOR1P1Q9H4R4 102 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 OR6C3Q9NZP0 311 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 DPM3Q9P2X0 92 aa12.95□□□□□ -0.34
USE1-201ENST00000263897 TRAV24A0A0B4J272 114 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 TRBV5-5A0A0J9YX44 114 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 EFCAB10A6NFE3 127 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 ZNF729A6NN14 1252 aaPredicted RBP12.94□□□□□ -0.34
USE1-201ENST00000263897 FAM90A22PA8MWA6 464 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 GPX5O75715 221 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 CDRT1O95170 752 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 HTR3BO95264 441 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 CGB3P0DN86 165 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 CGB7P0DN87 165 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 CD34P28906 385 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 ZNF93P35789 620 aaPredicted RBP12.94□□□□□ -0.34
USE1-201ENST00000263897 GDNFP39905 211 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 OR3A4PP47883 348 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 PPP3R1P63098 170 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 BDH1Q02338 343 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 SLC34A1Q06495 639 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 IL13RA2Q14627 380 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 HERPUD1Q15011 391 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 C17orf58Q2M2W7 97 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms