RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ST8SIA4Q92187 359 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 DPCDQ9BVM2 203 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 PPA2Q9H2U2 334 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 TMEM165Q9HC07 324 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 ABCB10Q9NRK6 738 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 KLK11Q9UBX7 282 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF230Q9UIE0 474 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF222Q9UK12 451 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 FBXO9Q9UK97 447 aaPredicted RBP8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 MAB21L2Q9Y586 359 aa8.14□□□□□ -1.11
SNRNP40-201ENST00000263694 TRAV39A0A0B4J263 110 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 MEX3AA1L020 520 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A10PA6NDY2 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A18PA6NE21 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A16PA6NEW6 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A20PA6NIJ5 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A8PA6NJQ4 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A7PA6NKC0 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A22PA8MWA6 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A12PA8MX19 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A5PA8MXJ8 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A23PA8MXZ1 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 PPIHO43447 177 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A15PP0C7V4 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A13PP0C7W8 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A14PP0C7W9 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM90A24PP0C7X0 464 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 PTBP1P26599 531 aaKnown RBP eCLIP8.13□□□□□ -1.114e-9■□□□□ 10.7
SNRNP40-201ENST00000263694 PITPNAQ00169 270 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 ARFRP1Q13795 201 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 ATXN7L3Q14CW9 347 aaPredicted RBP8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM189A2Q15884 450 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 MPV17LQ2QL34 196 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 HACD4Q5VWC8 232 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 TEX36Q5VZQ5 186 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 STUMQ69YW2 141 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 BAIAP2L2Q6UXY1 529 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 Q6ZPA2 131 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 C17orf107Q6ZR85 190 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 TRAPPC6BQ86SZ2 158 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 C1orf87Q8N0U7 546 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 FAM216BQ8N7L0 139 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 GDPD1Q8N9F7 314 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 ASCC1Q8N9N2 400 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 PERPQ96FX8 193 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 GAFA1Q96PS6 74 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 TMEM246Q9BRR3 403 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 THAP7Q9BT49 309 aaPredicted RBP8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 CXorf56Q9H5V9 222 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 DLL4Q9NR61 685 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 RCC2Q9P258 522 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 HSF4Q9ULV5 492 aa8.13□□□□□ -1.11
SNRNP40-201ENST00000263694 DOCK11Q5JSL3 2073 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 MED13LQ71F56 2210 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 TRAV38-1A0A0B4J264 116 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 ISPDA4D126 451 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 MCRIP1C9JLW8 97 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 TNFRSF13BO14836 293 aaPredicted RBP8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 ORC5O43913 435 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF737O75373 536 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 FCN3O75636 299 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 SCGNO76038 276 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 AVPP01185 164 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 MELTFP08582 738 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 GSTP1P09211 210 aaKnown RBP8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 IL7P13232 177 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 MUC1P15941 1255 aaPredicted RBP8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 LMO1P25800 156 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 OR3A1P47881 315 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 ATP5J2P56134 94 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 GNG2P59768 71 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 BTG1P62324 171 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 AESQ08117 197 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 LINC00596Q86U02 117 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 GPX8Q8TED1 209 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 SMIM4Q8WVI0 70 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 FCAMRQ8WWV6 532 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 NUDT16L1Q9BRJ7 211 aaKnown RBP8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 SHARPINQ9H0F6 387 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 NARFLQ9H6Q4 476 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 IFT22Q9H7X7 185 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 ETAA1Q9NY74 926 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 GLS2Q9UI32 602 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 MAP1AP78559 2803 aaPredicted RBP8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 ARHGAP32A7KAX9 2087 aa8.12□□□□□ -1.11
SNRNP40-201ENST00000263694 IGKV1D-8A0A087WSZ0 117 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 A0A1W2PQ09 198 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 GABARAPH6UMI1 98 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 IFNL4K9M1U5 179 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 CTDSPLO15194 276 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 TMPRSS2O15393 492 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 GSTZ1O43708 216 aaPredicted RBP8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 IGHV2-70P01814 119 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 STEAP3Q658P3 488 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 C16orf87Q6PH81 154 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 ZNF788Q6ZQV5 615 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 DNM1P46Q6ZS02 220 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 OR4K15Q8NH41 348 aa8.11□□□□□ -1.11
SNRNP40-201ENST00000263694 CCDC107Q8WV48 283 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms