RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 RBM39Q14498 530 aaKnown RBP13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 Q6P435 159 aa13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 MITD1Q8WV92 249 aa13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 GTF3AQ92664 365 aaKnown RBP13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 RDH5Q92781 318 aa13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 TMEM230Q96A57 120 aa13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 PHB2Q99623 299 aa13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 DPCDQ9BVM2 203 aaPredicted RBP13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 WDR13Q9H1Z4 485 aa13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 DUSP13Q9UII6 198 aa13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 MGAT4AQ9UM21 535 aa13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 MEMO1Q9Y316 297 aa13.31□□□□□ -0.28
FOXRED1-201ENST00000263578 SPTA1P02549 2419 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 HS3ST1O14792 307 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 DEGS1O15121 323 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 SIX6O95475 246 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 DUS4LO95620 317 aaKnown RBP13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 PI3P19957 117 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 IFITM2Q01629 132 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 SPIN3Q5JUX0 258 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 PRAMEF6Q5VXH4 476 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 FIP1L1Q6UN15 594 aaKnown RBP13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 SSX8Q7RTT4 187 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 LRP11Q86VZ4 500 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 C9orf62Q8N4C0 152 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 OR11H4Q8NGC9 324 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 TMEM171Q8WVE6 324 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 ASB13Q8WXK3 278 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 RTBDNQ9BSG5 229 aaPredicted RBP13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 RIMS4Q9H426 269 aaPredicted RBP13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 HES4Q9HCC6 221 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 Q9N2K0 584 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 OPN4Q9UHM6 478 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 C14orf166Q9Y224 244 aaKnown RBP13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 PCNX1Q96RV3 2341 aa13.3□□□□□ -0.28
FOXRED1-201ENST00000263578 SHANK1Q9Y566 2161 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 GLP1RP43220 463 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 GMFBP60983 142 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 DHODHQ02127 395 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 ZNF146Q15072 292 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 DCAF12L2Q5VW00 463 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 LAMTOR1Q6IAA8 161 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 VHLLQ6RSH7 139 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 DHRS11Q6UWP2 260 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 TMEM108Q6UXF1 575 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 C11orf53Q8IXP5 236 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 ST6GALNAC3Q8NDV1 305 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 CASTOR1Q8WTX7 329 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 DECR2Q9NUI1 292 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 PPP3CBP16298 524 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 S100A1P23297 94 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 CA7P43166 264 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 LPCAT3Q6P1A2 487 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 ZNF826PQ6ZT77 177 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 WFDC8Q8IUA0 241 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 OR2Z1Q8NG97 314 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 SYT3Q9BQG1 590 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 TMEM246Q9BRR3 403 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 LIME1Q9H400 295 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 HSPB11Q9Y547 144 aa13.29□□□□□ -0.28
FOXRED1-201ENST00000263578 IGLV3-9A0A075B6K5 115 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 TRBV6-6A0A0A6YYG2 114 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 KIR2DS1A0A191URI9 304 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 SLC34A2O95436 690 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 OR2H2O95918 312 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 MDH2P40926 338 aaKnown RBP13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 CD200P41217 278 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 KIR2DS4P43632 304 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 KIR2DS1Q14954 304 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 PAN3Q58A45 887 aaKnown RBP13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 LY6G6FQ5SQ64 297 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 WDR82Q6UXN9 313 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 GRPEL2Q8TAA5 225 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 MRPL30Q8TCC3 161 aaKnown RBP13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 WDR89Q96FK6 387 aaPredicted RBP13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 DHRS9Q9BPW9 319 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 TMPRSS13Q9BYE2 586 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 FXYD6Q9H0Q3 95 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 PRORYQ9H606 182 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 UFSP2Q9NUQ7 469 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 SLC23A1Q9UHI7 598 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 CHD8Q9HCK8 2581 aa13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 CHD3Q12873 2000 aaKnown RBP13.28□□□□□ -0.28
FOXRED1-201ENST00000263578 PLSCR5A0PG75 271 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 ZSCAN5BA6NJL1 495 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 SIRPB1O00241 398 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 SLC33A1O00400 549 aaPredicted RBP13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 SH2D1BO14796 132 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 SFT2D2O95562 160 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 CTSDP07339 412 aaPredicted RBP13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 GLRA1P23415 457 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 PTAFRP25105 342 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 FCGR2CP31995 323 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 Q5BKY6 102 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 LIN54Q6MZP7 749 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 NUP37Q8NFH4 326 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 CLEC4MQ9H2X3 399 aaPredicted RBP13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 ZZEF1O43149 2961 aa13.27□□□□□ -0.28
FOXRED1-201ENST00000263578 hCG_1807616A0A1W2PRN6 198 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms