RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TCF7L1Q9HCS4 588 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 HHLA2Q9UM44 414 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 ETV7Q9Y603 341 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 ANK3Q12955 4377 aaKnown RBP14.03□□□□□ -0.16
SDCBP-201ENST00000260130 NSD1Q96L73 2696 aaPredicted RBP14.03□□□□□ -0.16
SDCBP-201ENST00000260130 ANKRD20A5PA0PJZ0 165 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 TPPPO94811 219 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 ZFPL1O95159 310 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 CFHR2P36980 270 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 VEGFCP49767 419 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 HOXA4Q00056 320 aaPredicted RBP14.03□□□□□ -0.16
SDCBP-201ENST00000260130 EXOSC2Q13868 293 aaKnown RBP14.03□□□□□ -0.16
SDCBP-201ENST00000260130 SCCPDHQ8NBX0 429 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 DEFB108BQ8NET1 73 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 OR5AK2Q8NH90 309 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 FOXJ3Q9UPW0 622 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 TMEM212A6NML5 194 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 INAFM1C9JVW0 142 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 MNDAP41218 407 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 GRK1Q15835 563 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 Q499Y3 187 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 IDO2Q6ZQW0 420 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 OR10AC1Q8NH08 325 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 LRRC29Q8WV35 223 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 COMMD4Q9H0A8 199 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 OR51I2Q9H344 312 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 GPN1Q9HCN4 374 aaPredicted RBP14.02□□□□□ -0.16
SDCBP-201ENST00000260130 FLVCR2Q9UPI3 526 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 MAB21L2Q9Y586 359 aa14.02□□□□□ -0.16
SDCBP-201ENST00000260130 CEACAM18A8MTB9 384 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 LGALS8O00214 317 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 MSMBP08118 114 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 GLDNQ6ZMI3 551 aaPredicted RBP14.02□□□□□ -0.17
SDCBP-201ENST00000260130 UXS1Q8NBZ7 420 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 OR51A4Q8NGJ6 313 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 PP6455Q8WZ26 134 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 RGP1Q92546 391 aaPredicted RBP14.02□□□□□ -0.17
SDCBP-201ENST00000260130 ORAI1Q96D31 301 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 CHST5Q9GZS9 411 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 LPAR2Q9HBW0 351 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 OR5V1Q9UGF6 321 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 NUP50Q9UKX7 468 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 KCNS2Q9ULS6 477 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 SVEP1Q4LDE5 3571 aa14.02□□□□□ -0.17
SDCBP-201ENST00000260130 SETD2Q9BYW2 2564 aaPredicted RBP14.01□□□□□ -0.17
SDCBP-201ENST00000260130 C3orf80F5H4A9 247 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 ARPC1BO15143 372 aaKnown RBP14.01□□□□□ -0.17
SDCBP-201ENST00000260130 MPC2O95563 127 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 CD80P33681 288 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 UBE2V2Q15819 145 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 COMMD7Q86VX2 200 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 SERPINA12Q8IW75 414 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 OR10Z1Q8NGY1 313 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 OR51F2Q8NH61 342 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 LRRC20Q8TCA0 184 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 FGGYQ96C11 551 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 ADAT3Q96EY9 351 aaPredicted RBP14.01□□□□□ -0.17
SDCBP-201ENST00000260130 KLK11Q9UBX7 282 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 MIOXQ9UGB7 285 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 SLC7A11Q9UPY5 501 aa14.01□□□□□ -0.17
SDCBP-201ENST00000260130 TRAV38-1A0A0B4J264 116 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 OOEPA6NGQ2 149 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 WNT2P09544 360 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 EGR1P18146 543 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 CPT2P23786 658 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 DVL1P1P54792 670 aaPredicted RBP14□□□□□ -0.17
SDCBP-201ENST00000260130 SCAND1P57086 179 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 TSPAN5P62079 268 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 Q6ZTK2 550 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 OR13C3Q8NGS6 347 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 GCDHQ92947 438 aaPredicted RBP14□□□□□ -0.17
SDCBP-201ENST00000260130 TECTBQ96PL2 329 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 MGAT4CQ9UBM8 478 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 NF1P21359 2839 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 RPS10-NUDT3A0A1W2PQS6 291 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 PQLC2LA1A4F0 135 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 F5H0A9 414 aaPredicted RBP14□□□□□ -0.17
SDCBP-201ENST00000260130 G3V3Q6 166 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 I3L521 148 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 IL5P05113 134 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 GIPP09681 153 aaPredicted RBP14□□□□□ -0.17
SDCBP-201ENST00000260130 ZNF20P17024 532 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 CDK2P24941 298 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 CLDN12P56749 244 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 ZNF573Q86YE8 665 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 TMEM186Q96B77 213 aa14□□□□□ -0.17
SDCBP-201ENST00000260130 SNRPGP15A8MWD9 76 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 SRRM5B3KS81 715 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 CREBL2O60519 120 aaPredicted RBP13.99□□□□□ -0.17
SDCBP-201ENST00000260130 RPS2P15880 293 aaKnown RBP13.99□□□□□ -0.17
SDCBP-201ENST00000260130 FAUP35544 74 aaKnown RBP13.99□□□□□ -0.17
SDCBP-201ENST00000260130 HAAOP46952 286 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 DHODHQ02127 395 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 TEX36Q5VZQ5 186 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 HAGHLQ6PII5 290 aaPredicted RBP13.99□□□□□ -0.17
SDCBP-201ENST00000260130 AQP3Q92482 292 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 HIF1ANQ9NWT6 349 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 TMEM160Q9NX00 188 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 ABCA2Q9BZC7 2435 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 TRBV5-5A0A0J9YX44 114 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms