RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TGIF2LYQ8IUE0 185 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 OR52M1Q8NGK5 317 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 WDYHV1Q96HA8 205 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 BCO1Q9HAY6 547 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 PFDN2Q9UHV9 154 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 CHD3Q12873 2000 aaKnown RBP7.79□□□□□ -1.16
CKAP2-201ENST00000258607 KIAA1324LA8MWY0 1029 aaPredicted RBP7.79□□□□□ -1.16
CKAP2-201ENST00000258607 H0YIZ8 118 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 TERTO14746 1132 aaKnown RBP7.79□□□□□ -1.16
CKAP2-201ENST00000258607 ALX3O95076 343 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 SLC34A2O95436 690 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 CRYGSP22914 178 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 PPP1CBP62140 327 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 TGFBR3Q03167 851 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 ABHD17AQ96GS6 310 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 FAM210AQ96ND0 272 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 HEXA-AS1Q9H8Q6 139 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 SH2D2AQ9NP31 389 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 DCAF16Q9NXF7 216 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 ADAMTS20P59510 1910 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 WNK1Q9H4A3 2382 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 IGKV1D-13A0A0B4J2D9 117 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 TTLL8A6PVC2 850 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 LDLRAD4O15165 306 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 IFNA21P01568 189 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 IGKV1-13P0DP09 117 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 PSMB6P28072 239 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 NHLH2Q02577 135 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 TCF15Q12870 199 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 NDUFA5Q16718 116 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 TMEM128Q5BJH2 165 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF695Q8IW36 515 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 GAPTQ8N292 157 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 ZADH2Q8N4Q0 377 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 ST8SIA2Q92186 375 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF286AQ9HBT8 521 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 SDHAF2Q9NX18 166 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 NUP50Q9UKX7 468 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 ACANP16112 2415 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 PLSCR5A0PG75 271 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 KRASP01116 189 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 MMP7P09237 267 aaPredicted RBP7.79□□□□□ -1.16
CKAP2-201ENST00000258607 PRKACBP22694 351 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 ZBTB25P24278 435 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 SMCO1Q147U7 214 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 TBC1D28Q2M2D7 210 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 AADACL3Q5VUY0 350 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 GGNBP1Q5YKI7 109 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 OR5M8Q8NGP6 311 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 SF3B5Q9BWJ5 86 aaKnown RBP7.79□□□□□ -1.16
CKAP2-201ENST00000258607 SLC2A9Q9NRM0 540 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 METRNQ9UJH8 293 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 SPEF1Q9Y4P9 236 aa7.79□□□□□ -1.16
CKAP2-201ENST00000258607 CFAP46Q8IYW2 2715 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 APELAP0DMC3 54 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 FUT6P51993 359 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 PLEKHN1Q494U1 663 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-201ENST00000258607 ADAM5Q6NVV9 412 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 PDZD9Q8IXQ8 264 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 FGFRL1Q8N441 504 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 OR1S2Q8NGQ3 325 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 SUN5Q8TC36 379 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 ADAMTS17Q8TE56 1095 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 APOBEC3DQ96AK3 386 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-201ENST00000258607 WBP1Q96G27 269 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 Q96M66 194 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 RTBDNQ9BSG5 229 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-201ENST00000258607 SCPEP1Q9HB40 452 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 C12orf4Q9NQ89 552 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 KCNIP3Q9Y2W7 256 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 FAM24AA6NFZ4 105 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 RFPL4AA6NLU0 287 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 ATP6V1G2-DDX39BF2Z307 99 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 RFPL4AL1F8VTS6 287 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 SULT1C2O00338 296 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 MSTNO14793 375 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 TK1P04183 234 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 CD1AP06126 327 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 FUT3P21217 361 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 PAX6P26367 422 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 GCH1P30793 250 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 SUPT4H1P63272 117 aaKnown RBP7.78□□□□□ -1.16
CKAP2-201ENST00000258607 EIF3IQ13347 325 aaKnown RBP7.78□□□□□ -1.16
CKAP2-201ENST00000258607 SPRNQ5BIV9 151 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 ABLIM2Q6H8Q1 611 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF767PQ75MW2 155 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 CCDC28AQ8IWP9 274 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 IGFBPL1Q8WX77 278 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 SNRNP40Q96DI7 357 aaKnown RBP7.78□□□□□ -1.16
CKAP2-201ENST00000258607 ABHD14BQ96IU4 210 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 TP53RKQ96S44 253 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF391Q9UJN7 358 aa7.78□□□□□ -1.16
CKAP2-201ENST00000258607 PCP4L1A6NKN8 68 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 MED6O75586 246 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 IFNA2P01563 188 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 DEFA4P12838 97 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 RAB6AP20340 208 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 PSG7Q13046 419 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF154Q13106 437 aa7.77□□□□□ -1.16
CKAP2-201ENST00000258607 CXorf66Q5JRM2 361 aaPredicted RBP7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms