RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SOX15O60248 233 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 HIKESHIQ53FT3 197 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 SFTPA2Q8IWL1 248 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 PTX4Q96A99 478 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 KRTCAP3Q53RY4 240 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 TBC1D26Q86UD7 250 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 ZNF429Q86V71 674 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 SLC25A40Q8TBP6 338 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 NEURL2Q9BR09 285 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 DOCK5Q9H7D0 1870 aa16.64■□□□□ 0.26
PTPRE-201ENST00000254667 FAM24AA6NFZ4 105 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 SMIM17P0DL12 118 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 C1RLQ9NZP8 487 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 PILRBQ9UKJ0 227 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 MAP1LC3B2A6NCE7 125 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 OR4A8P0C604 315 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 PMELP40967 661 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 MAP1LC3BQ9GZQ8 125 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 HEXA-AS1Q9H8Q6 139 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 ZDHHC11Q9H8X9 412 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 TRIP12Q14669 1992 aaPredicted RBP16.64■□□□□ 0.25
PTPRE-201ENST00000254667 NRXN2Q9P2S2 1712 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 TXNDC12O95881 172 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 SFTA3P0C7M3 94 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 VDAC1P21796 283 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 SAP25Q8TEE9 199 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 KIF13BQ9NQT8 1826 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 P2RY1P47900 373 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 C1orf185Q5T7R7 199 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 SLC25A45Q8N413 288 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 ZNRF4Q8WWF5 429 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 R3HDM4Q96D70 268 aa16.64■□□□□ 0.25
PTPRE-201ENST00000254667 FTH1P19P0C7X4 201 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 NTF3P20783 257 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 ZNF441Q8N8Z8 693 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 A0A0J9YW62 118 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 OR5H1A6NKK0 313 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 AGFG2O95081 481 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 S100A4P26447 101 aaKnown RBP16.63■□□□□ 0.25
PTPRE-201ENST00000254667 ZNF385AQ96PM9 386 aaKnown RBP16.63■□□□□ 0.25
PTPRE-201ENST00000254667 PRSS27Q9BQR3 290 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 WSB1Q9Y6I7 421 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 TMEM18Q96B42 140 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 SH2D2AQ9NP31 389 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 CLCF1Q9UBD9 225 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 V9GYH0 126 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 KNTC1P50748 2209 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 RAB5AP20339 215 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 HLA-DRB3P79483 266 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 TAF1LQ8IZX4 1826 aa16.63■□□□□ 0.25
PTPRE-201ENST00000254667 K7ESF4 209 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 CDC34P49427 236 aaPredicted RBP16.62■□□□□ 0.25
PTPRE-201ENST00000254667 SYNGR2O43760 224 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 PPYP01298 95 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 CD200P41217 278 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 PRSS12P56730 875 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 PAX5Q02548 391 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 P2RY6Q15077 328 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 CLEC18BQ6UXF7 455 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 MDP1Q86V88 176 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 OR4A4PQ8NGN8 299 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 GPA33Q99795 319 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 GDF15Q99988 308 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 ZNF426Q9BUY5 554 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 KCNK15Q9H427 330 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 PLAC9Q5JTB6 97 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 FNDC7Q5VTL7 733 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 FAM122AQ96E09 287 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 GPX7Q96SL4 187 aaPredicted RBP16.62■□□□□ 0.25
PTPRE-201ENST00000254667 A0A0U1RQV5 110 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 CENPVL1A0A0U1RR11 272 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 SRP14P37108 136 aaKnown RBP16.62■□□□□ 0.25
PTPRE-201ENST00000254667 SCARF2Q96GP6 870 aaPredicted RBP16.62■□□□□ 0.25
PTPRE-201ENST00000254667 FBXL17Q9UF56 701 aa16.62■□□□□ 0.25
PTPRE-201ENST00000254667 MBPP02686 304 aaPredicted RBP16.61■□□□□ 0.25
PTPRE-201ENST00000254667 VSIG8P0DPA2 414 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 ZP3P21754 424 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 MNX1P50219 401 aaPredicted RBP16.61■□□□□ 0.25
PTPRE-201ENST00000254667 ST6GALNAC2Q9UJ37 374 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 ZMIZ1Q9ULJ6 1067 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 YTHDF2Q9Y5A9 579 aaKnown RBP16.61■□□□□ 0.25
PTPRE-201ENST00000254667 PRR7Q8TB68 274 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 TRAV8-7A0A075B6U6 113 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 RPL36A-HNRNPH2H7BZ11 118 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 ZNF528Q3MIS6 628 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 DIRC2Q96SL1 478 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 EPOPA6NHQ4 379 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 SLC25A5P05141 298 aaKnown RBP16.61■□□□□ 0.25
PTPRE-201ENST00000254667 ASCL1P50553 236 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 TSPO2Q5TGU0 170 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 SLC25A42Q86VD7 318 aa16.61■□□□□ 0.25
PTPRE-201ENST00000254667 HSD17B10Q99714 261 aaKnown RBP16.61■□□□□ 0.25
PTPRE-201ENST00000254667 ZNF638Q14966 1978 aaKnown RBP16.61■□□□□ 0.25
PTPRE-201ENST00000254667 TNXAQ16473 311 aa16.6■□□□□ 0.25
PTPRE-201ENST00000254667 MEX3AA1L020 520 aaKnown RBP16.6■□□□□ 0.25
PTPRE-201ENST00000254667 AHRRA9YTQ3 701 aa16.6■□□□□ 0.25
PTPRE-201ENST00000254667 OR52L2PQ8NGH6 319 aa16.6■□□□□ 0.25
PTPRE-201ENST00000254667 C2CD4CQ8TF44 421 aa16.6■□□□□ 0.25
PTPRE-201ENST00000254667 NPTNQ9Y639 398 aa16.6■□□□□ 0.25
PTPRE-201ENST00000254667 LIMS1P48059 325 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms