RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 HMGB3O15347 200 aaKnown RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 EIF1BO60739 113 aaKnown RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 CA11O75493 328 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 CLN5O75503 358 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 F10P00742 488 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 OR5H8P0DN80 308 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 OPN5Q6U736 354 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 ASCL4Q6XD76 172 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 PRR18Q8N4B5 295 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 OR2Y1Q8NGV0 311 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 WNT5BQ9H1J7 359 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 SLC7A11Q9UPY5 501 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 C3orf80F5H4A9 247 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 MBPP02686 304 aaPredicted RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 CTSDP07339 412 aaPredicted RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 OR5AC1P0C628 307 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 FKBP2P26885 142 aaKnown RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 GNRHRP30968 328 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 PIGPP57054 158 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 VAMP2P63027 116 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 FAM3AP98173 230 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 TMEM187Q14656 261 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 DHRS7BQ6IAN0 325 aaPredicted RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 FBXW12Q6X9E4 464 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 LYZL2Q7Z4W2 148 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 RPS19BP1Q86WX3 136 aaKnown RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 M1APQ8TC57 530 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 ZNF845Q96IR2 970 aaPredicted RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 SEC11CQ9BY50 192 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 DNAJB11Q9UBS4 358 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 KLF2Q9Y5W3 355 aaPredicted RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 SPTBN2O15020 2390 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 HEATR1Q9H583 2144 aaKnown RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 IGHV3-64DA0A0J9YX35 117 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 hCG_38984A0A1B0GV85 526 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 ZNF503-AS2A6NEH8 195 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 VAMP5O95183 116 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 CD5P06127 495 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 KLK3P07288 261 aaPredicted RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 SULT1A1P50225 295 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 RAB35Q15286 201 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 RHEBQ15382 184 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 CPEB3Q8NE35 698 aaKnown RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 OR52M1Q8NGK5 317 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 RARRES2Q99969 163 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 SH3BGRL3Q9H299 93 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 FAM212BQ9NTI7 297 aaPredicted RBP8.74□□□□□ -1.01
COPB1-201ENST00000249923 PADI1Q9ULC6 663 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 POLEQ07864 2286 aa8.74□□□□□ -1.01
COPB1-201ENST00000249923 DMXL1Q9Y485 3027 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 A0A0U1RQK1 487 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 CYTIPO60759 359 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 S100A8P05109 93 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 RAB5AP20339 215 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 EIF2S3P41091 472 aaKnown RBP8.73□□□□□ -1.01
COPB1-201ENST00000249923 CDPF1Q6NVV7 123 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 OR1F12Q8NHA8 337 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 LYPD6BQ8NI32 183 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 ABHD3Q8WU67 409 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 PRDM6Q9NQX0 595 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 GFOD1Q9NXC2 390 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 LUZP4Q9P127 313 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 HSF4Q9ULV5 492 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 KCNIP3Q9Y2W7 256 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 SOX15O60248 233 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 CBR3O75828 277 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 NPBWR2P48146 333 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 RAC3P60763 192 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 NHLH2Q02577 135 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 SSX2Q16385 188 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 EXT1Q16394 746 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 PPP1R32Q7Z5V6 425 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 SKA3Q8IX90 412 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 FBXL14Q8N1E6 418 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 TMEM156Q8N614 296 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 HLA-CQ95604 372 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 C10orf35Q96D05 121 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 MSI2Q96DH6 328 aaKnown RBP8.73□□□□□ -1.01
COPB1-201ENST00000249923 WFIKKN1Q96NZ8 548 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 C1orf123Q9NWV4 160 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 ZNF724A8MTY0 619 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 PHF1O43189 567 aaPredicted RBP8.73□□□□□ -1.01
COPB1-201ENST00000249923 CXCL13O43927 109 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 IGHV3-9P01782 118 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 HLA-HP01893 362 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 CFIP05156 583 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 CYC1P08574 325 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 SULT1A2P50226 295 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 FOXG1P55316 489 aaPredicted RBP8.73□□□□□ -1.01
COPB1-201ENST00000249923 ABLIM2Q6H8Q1 611 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 SPTSSAQ969W0 71 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 GPR61Q9BZJ8 451 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 P4HTMQ9NXG6 502 aa8.73□□□□□ -1.01
COPB1-201ENST00000249923 ARHGAP21Q5T5U3 1957 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 PPP1R2P9O14990 202 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 SLC34A2O95436 690 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 CST2P09228 141 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 MMP7P09237 267 aaPredicted RBP8.72□□□□□ -1.01
COPB1-201ENST00000249923 BMP5P22003 454 aa8.72□□□□□ -1.01
COPB1-201ENST00000249923 PPP1CCP36873 323 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms