RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 FAM212BQ9NTI7 297 aaPredicted RBP12.39□□□□□ -0.43
HIF3A-202ENST00000244303 FOXJ2Q9P0K8 574 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 NOSIPQ9Y314 301 aaKnown RBP12.39□□□□□ -0.43
HIF3A-202ENST00000244303 MRPS18CQ9Y3D5 142 aaKnown RBP12.39□□□□□ -0.43
HIF3A-202ENST00000244303 A0A1W2PNU3 283 aaPredicted RBP12.39□□□□□ -0.43
HIF3A-202ENST00000244303 C1orf196B1AJZ1 125 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 GPR137BO60478 399 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 PPYP01298 95 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 CCNOP22674 350 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 MEX3BQ6ZN04 569 aaKnown RBP12.39□□□□□ -0.43
HIF3A-202ENST00000244303 SLC35G3Q8N808 338 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 CCDC71LQ8N9Z2 235 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 ZMAT5Q9UDW3 170 aaKnown RBP12.39□□□□□ -0.43
HIF3A-202ENST00000244303 COLCA2A8K830 154 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 MRPL33O75394 65 aaKnown RBP12.38□□□□□ -0.43
HIF3A-202ENST00000244303 CBR1P16152 277 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 BCL3P20749 454 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 SRYQ05066 204 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 PLA2G2CQ5R387 149 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 C5orf24Q7Z6I8 188 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 OR56B2PQ8NGI1 322 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 TMEM45BQ96B21 275 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 THOC3Q96J01 351 aaKnown RBP12.38□□□□□ -0.43
HIF3A-202ENST00000244303 LOXL4Q96JB6 756 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 PAPOLGQ9BWT3 736 aaKnown RBP12.38□□□□□ -0.43
HIF3A-202ENST00000244303 SLC7A10Q9NS82 523 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
HIF3A-202ENST00000244303 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
HIF3A-202ENST00000244303 A0A096LPE4 126 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 BORCS7-ASMTA0A0B4J1R7 106 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 A0A1W2PPZ6 126 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 CDX4O14627 284 aaPredicted RBP12.37□□□□□ -0.43
HIF3A-202ENST00000244303 ST8SIA3O43173 380 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 NME2P1O60361 137 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 ACAA1P09110 424 aaPredicted RBP12.37□□□□□ -0.43
HIF3A-202ENST00000244303 CCL2P13500 99 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 PTAFRP25105 342 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 AKR1C3P42330 323 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 P2RY1P47900 373 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 ARF1P84077 181 aaKnown RBP12.37□□□□□ -0.43
HIF3A-202ENST00000244303 NHLH2Q02577 135 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 IL13RA2Q14627 380 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 MIDNQ504T8 468 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 GPR157Q5UAW9 335 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 COLCA1Q6ZS62 124 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 SECTM1Q8WVN6 248 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 EXTL1Q92935 676 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 SLAMF9Q96A28 289 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 AKR1E2Q96JD6 320 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 RPS10P5Q9NQ39 176 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 CRIM1Q9NZV1 1036 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 LRFN1Q9P244 771 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 RPL36A-HNRNPH2H7BZ11 118 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 TSPAN15O95858 294 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 SEC11BP0C7V7 166 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 DANCRP0C864 163 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 ZNF616Q08AN1 781 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 HABP2Q14520 560 aaPredicted RBP12.37□□□□□ -0.43
HIF3A-202ENST00000244303 TSC22D1Q15714 1073 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 SLC16A13Q7RTY0 426 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 CLCC1Q96S66 551 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 GINS3Q9BRX5 216 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 FGF23Q9GZV9 251 aaPredicted RBP12.37□□□□□ -0.43
HIF3A-202ENST00000244303 BOKQ9UMX3 212 aaPredicted RBP12.37□□□□□ -0.43
HIF3A-202ENST00000244303 TMED3Q9Y3Q3 217 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 KMT2EQ8IZD2 1858 aa12.37□□□□□ -0.43
HIF3A-202ENST00000244303 TNRC6AQ8NDV7 1962 aaKnown RBP12.37□□□□□ -0.43
HIF3A-202ENST00000244303 C3orf85A0A1B0GTC6 90 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 MPPED1O15442 326 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 CELA3AP09093 270 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 SNCAP37840 140 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 PMELP40967 661 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 FHITP49789 147 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 PPT1P50897 306 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 PRDX4Q13162 271 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 NRN1LQ496H8 165 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 C15orf54Q8N8G6 183 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 OR4D5Q8NGN0 318 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 HPSE2Q8WWQ2 592 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 SH3BGRL3Q9H299 93 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 HLA-HP01893 362 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 GNRHRP30968 328 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 HAAOP46952 286 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 GPM6AP51674 278 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 FOXG1P55316 489 aaPredicted RBP12.36□□□□□ -0.43
HIF3A-202ENST00000244303 ETV3LQ6ZN32 361 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 Q8NFD4 153 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
HIF3A-202ENST00000244303 CACFD1Q9UGQ2 172 aa12.36□□□□□ -0.43
HIF3A-202ENST00000244303 IGKV3D-15A0A087WSY6 115 aa12.35□□□□□ -0.43
HIF3A-202ENST00000244303 C5orf49A4QMS7 147 aa12.35□□□□□ -0.43
HIF3A-202ENST00000244303 NKX2-6A6NCS4 301 aa12.35□□□□□ -0.43
HIF3A-202ENST00000244303 C1QL1O75973 258 aa12.35□□□□□ -0.43
HIF3A-202ENST00000244303 FABP1P07148 127 aa12.35□□□□□ -0.43
HIF3A-202ENST00000244303 FOLR2P14207 255 aa12.35□□□□□ -0.43
HIF3A-202ENST00000244303 CAMLGP49069 296 aa12.35□□□□□ -0.43
HIF3A-202ENST00000244303 EIF2S3LQ2VIR3 472 aaKnown RBP12.35□□□□□ -0.43
HIF3A-202ENST00000244303 TUSC5Q8IXB3 177 aa12.35□□□□□ -0.43
HIF3A-202ENST00000244303 HSD17B11Q8NBQ5 300 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms